RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CALML3P27482 149 aa29.58■■■□□ 2.33
U2AF1-201ENST00000291552 IMMTQ16891 758 aaKnown RBP29.58■■■□□ 2.33
U2AF1-201ENST00000291552 CDH23Q9H251 3354 aa29.58■■■□□ 2.33
U2AF1-201ENST00000291552 ADD3Q9UEY8 706 aaKnown RBP29.58■■■□□ 2.33
U2AF1-201ENST00000291552 A0A0C4DFX4 3053 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 TIMP1P01033 207 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 RPS6P62753 249 aaKnown RBP29.57■■■□□ 2.32
U2AF1-201ENST00000291552 CCDC178Q5BJE1 867 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 RNF207Q6ZRF8 634 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 KIAA1211Q6ZU35 1233 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 FAM161BQ96MY7 647 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 AP5M1Q9H0R1 490 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 KAT14Q9H8E8 782 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 CTNNA3Q9UI47 895 aa29.57■■■□□ 2.32
U2AF1-201ENST00000291552 SCN10AQ9Y5Y9 1956 aa29.56■■■□□ 2.32
U2AF1-201ENST00000291552 LOC102724159A0A0B4J2E5 919 aa29.56■■■□□ 2.32
U2AF1-201ENST00000291552 CD4P01730 458 aa29.56■■■□□ 2.32
U2AF1-201ENST00000291552 PWP2Q15269 919 aaKnown RBP29.56■■■□□ 2.32
U2AF1-201ENST00000291552 USH1GQ495M9 461 aa29.56■■■□□ 2.32
U2AF1-201ENST00000291552 PNMA2Q9UL42 364 aa29.56■■■□□ 2.32
U2AF1-201ENST00000291552 Q9Y3F1 56 aa29.56■■■□□ 2.32
U2AF1-201ENST00000291552 KIAA1217Q5T5P2 1943 aa29.55■■■□□ 2.32
U2AF1-201ENST00000291552 RBM47A0AV96 593 aaKnown RBP29.55■■■□□ 2.32
U2AF1-201ENST00000291552 EDNRBP24530 442 aa29.55■■■□□ 2.32
U2AF1-201ENST00000291552 DUSP28Q4G0W2 176 aa29.55■■■□□ 2.32
U2AF1-201ENST00000291552 RNPC3Q96LT9 517 aaKnown RBP29.55■■■□□ 2.32
U2AF1-201ENST00000291552 RAD50Q92878 1312 aa29.54■■■□□ 2.32
U2AF1-201ENST00000291552 SMAD3P84022 425 aaKnown RBP29.54■■■□□ 2.32
U2AF1-201ENST00000291552 CDC37Q16543 378 aaPredicted RBP29.54■■■□□ 2.32
U2AF1-201ENST00000291552 MFSD5Q6N075 450 aa29.54■■■□□ 2.32
U2AF1-201ENST00000291552 ADGRF4Q8IZF3 695 aa29.54■■■□□ 2.32
U2AF1-201ENST00000291552 CABYRO75952 493 aa29.53■■■□□ 2.32
U2AF1-201ENST00000291552 ASPRV1Q53RT3 343 aa29.53■■■□□ 2.32
U2AF1-201ENST00000291552 SLC17A8Q8NDX2 589 aa29.53■■■□□ 2.32
U2AF1-201ENST00000291552 WDR11Q9BZH6 1224 aa29.53■■■□□ 2.32
U2AF1-201ENST00000291552 KRT23Q9C075 422 aa29.53■■■□□ 2.32
U2AF1-201ENST00000291552 BAZ2BQ9UIF8 2168 aaKnown RBP29.53■■■□□ 2.32
U2AF1-201ENST00000291552 EYSQ5T1H1 3165 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 PSMC6P62333 389 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 ITGA7Q13683 1181 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 SEC23AQ15436 765 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 ZNF697Q5TEC3 545 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 CYB5R4Q7L1T6 521 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 C16orf59Q7L2K0 433 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 TBC1D5Q92609 795 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 PPP1R12CQ9BZL4 782 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 TTYH1Q9H313 450 aaPredicted RBP29.52■■■□□ 2.32
U2AF1-201ENST00000291552 CNNM2Q9H8M5 875 aa29.52■■■□□ 2.32
U2AF1-201ENST00000291552 CHMLP26374 656 aa29.51■■■□□ 2.31
U2AF1-201ENST00000291552 PTH1RQ03431 593 aa29.51■■■□□ 2.31
U2AF1-201ENST00000291552 QRICH1Q2TAL8 776 aa29.51■■■□□ 2.31
U2AF1-201ENST00000291552 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.51■■■□□ 2.31
U2AF1-201ENST00000291552 TAF6LQ9Y6J9 622 aa29.51■■■□□ 2.31
U2AF1-201ENST00000291552 CUL9Q8IWT3 2517 aa29.51■■■□□ 2.31
U2AF1-201ENST00000291552 UNC80Q8N2C7 3258 aa29.51■■■□□ 2.31
U2AF1-201ENST00000291552 UMODL1Q5DID0 1318 aa29.5■■■□□ 2.31
U2AF1-201ENST00000291552 TLR3O15455 904 aaKnown RBP29.5■■■□□ 2.31
U2AF1-201ENST00000291552 RGS22Q8NE09 1264 aa29.5■■■□□ 2.31
U2AF1-201ENST00000291552 DNERQ8NFT8 737 aa29.5■■■□□ 2.31
U2AF1-201ENST00000291552 COL20A1Q9P218 1284 aa29.5■■■□□ 2.31
U2AF1-201ENST00000291552 GBF1Q92538 1859 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 ZEB2O60315 1214 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 CSF2RAP15509 400 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 CYP2C18P33260 490 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 PDE4DQ08499 809 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 STAG2Q8N3U4 1231 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 UBAC1Q9BSL1 405 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 SEMA6BQ9H3T3 888 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 JMJD4Q9H9V9 463 aa29.49■■■□□ 2.31
U2AF1-201ENST00000291552 ABCB11O95342 1321 aa29.48■■■□□ 2.31
U2AF1-201ENST00000291552 CYP21A2P08686 494 aa29.48■■■□□ 2.31
U2AF1-201ENST00000291552 PARP1P09874 1014 aaKnown RBP29.48■■■□□ 2.31
U2AF1-201ENST00000291552 TMEM240Q5SV17 173 aa29.48■■■□□ 2.31
U2AF1-201ENST00000291552 COPS5Q92905 334 aa29.48■■■□□ 2.31
U2AF1-201ENST00000291552 TRPV6Q9H1D0 765 aa29.48■■■□□ 2.31
U2AF1-201ENST00000291552 B4GALT4O60513 344 aa29.47■■■□□ 2.31
U2AF1-201ENST00000291552 PPIGQ13427 754 aaKnown RBP eCLIP29.47■■■□□ 2.31
U2AF1-201ENST00000291552 IFIT1BQ5T764 474 aaKnown RBP29.47■■■□□ 2.31
U2AF1-201ENST00000291552 OR6J1Q8NGC5 347 aa29.47■■■□□ 2.31
U2AF1-201ENST00000291552 SYTL5Q8TDW5 730 aaPredicted RBP29.47■■■□□ 2.31
U2AF1-201ENST00000291552 SCN5AQ14524 2016 aa29.46■■■□□ 2.31
U2AF1-201ENST00000291552 ARIH2O95376 493 aa29.46■■■□□ 2.31
U2AF1-201ENST00000291552 PURAQ00577 322 aaKnown RBP29.46■■■□□ 2.31
U2AF1-201ENST00000291552 SLC35G1Q2M3R5 365 aa29.46■■■□□ 2.31
U2AF1-201ENST00000291552 RASIP1Q5U651 963 aa29.46■■■□□ 2.31
U2AF1-201ENST00000291552 CDX2Q99626 313 aaPredicted RBP29.46■■■□□ 2.31
U2AF1-201ENST00000291552 ACRP10323 421 aa29.45■■■□□ 2.31
U2AF1-201ENST00000291552 PPP2R5BQ15173 497 aa29.45■■■□□ 2.31
U2AF1-201ENST00000291552 SCFD2Q8WU76 684 aa29.45■■■□□ 2.31
U2AF1-201ENST00000291552 TAAR1Q96RJ0 339 aa29.45■■■□□ 2.31
U2AF1-201ENST00000291552 NOC4LQ9BVI4 516 aaKnown RBP29.45■■■□□ 2.31
U2AF1-201ENST00000291552 VAT1LQ9HCJ6 419 aa29.45■■■□□ 2.31
U2AF1-201ENST00000291552 CHD9Q3L8U1 2897 aa29.45■■■□□ 2.3
U2AF1-201ENST00000291552 MYO9BQ13459 2157 aa29.45■■■□□ 2.3
U2AF1-201ENST00000291552 PRUNE2Q8WUY3 3088 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 OPLAHO14841 1288 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 SGSM2O43147 1006 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 STOX1Q6ZVD7 989 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 FBXO11Q86XK2 927 aa29.44■■■□□ 2.3
U2AF1-201ENST00000291552 TMEM199Q8N511 208 aa29.44■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms