RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SEC31AO94979 1220 aaKnown RBP11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 CHRM1P11229 460 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 ATF7P17544 494 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 ESRRGP62508 458 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 ASPHQ12797 758 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 MORC3Q14149 939 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 PPP2R5BQ15173 497 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 PDCD2Q16342 344 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 NAA35Q5VZE5 725 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 ZNF496Q96IT1 587 aaPredicted RBP11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 SCYL1Q96KG9 808 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 FANCLQ9NW38 375 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 CDC23Q9UJX2 597 aa11.74□□□□□ -0.53
PKNOX1-201ENST00000291547 TTC4O95801 387 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 DCCP43146 1447 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 ZNF827Q17R98 1081 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 LRGUKQ96M69 825 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 NACA2Q9H009 215 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 VPS54Q9P1Q0 977 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 EPN1Q9Y6I3 576 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 MYCLP12524 364 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 CLCN6P51797 869 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 IL9RQ01113 521 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 PDCD7Q8N8D1 485 aaKnown RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 PSDA5PKW4 1024 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 RNF8O76064 485 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 KMT5BQ4FZB7 885 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 TAB3Q8N5C8 712 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 KBTBD3Q8NAB2 608 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 KLHDC4Q8TBB5 520 aa11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 N4BP2L2Q92802 583 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 PPWD1Q96BP3 646 aaKnown RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 JPH2Q9BR39 696 aaPredicted RBP11.73□□□□□ -0.53
PKNOX1-201ENST00000291547 ATF2P15336 505 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 IL1RL1Q01638 556 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 EEF1GP26641 437 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 EHHADHQ08426 723 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 GRM1Q13255 1194 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 NBPF9Q3BBW0 867 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 ARMC2Q8NEN0 867 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 USP28Q96RU2 1077 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 RIOK1Q9BRS2 568 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 POC1B-GALNT4F8VUJ3 575 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 CHUKO15111 745 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 SAT1P21673 171 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 CYP2J2P51589 502 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 MYOCDQ8IZQ8 938 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 ARMCX3Q9UH62 379 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 SCOCQ9UIL1 159 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 ZNF148Q9UQR1 794 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 TRPC6Q9Y210 931 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 AOX1Q06278 1338 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 KCNQ3O43525 872 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 KRT81Q14533 505 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 LRRC23Q53EV4 343 aaPredicted RBP11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 SCYL2Q6P3W7 929 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 CDAN1Q8IWY9 1227 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 ZMAT2Q96NC0 199 aaKnown RBP11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 RUNDC3BQ96NL0 473 aa11.72□□□□□ -0.53
PKNOX1-201ENST00000291547 TRPA1O75762 1119 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 CTDSPL2Q05D32 466 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 ME3Q16798 604 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 FAM89AQ96GI7 184 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 PASKQ96RG2 1323 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 NOP56O00567 594 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 SLC1A4P43007 532 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 TAF11Q15544 211 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 HADHQ16836 314 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 SUGP1Q8IWZ8 645 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 REXO1Q8N1G1 1221 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 XAGE2Q96GT9 111 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 NT5C3AQ9H0P0 336 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 HAUS2Q9NVX0 235 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 POLR2FP61218 127 aaKnown RBP11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 BFSP1Q12934 665 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 TCP11X2Q5H9J9 407 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 DCLK2Q8N568 766 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 BBOF1Q8ND07 529 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 HDAC11Q96DB2 347 aa11.71□□□□□ -0.53
PKNOX1-201ENST00000291547 H7C1D1 291 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 PRPF6O94906 941 aaKnown RBP11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 YWHAGP61981 247 aaKnown RBP eCLIP11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 RNASELQ05823 741 aaKnown RBP11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 TMED1Q13445 227 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 ANKRD20A4Q4UJ75 823 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 ANKRD20A8PQ5CZ79 823 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 ANKRD20A2Q5SQ80 823 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 ANKRD20A1Q5TYW2 823 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 FNBP4Q8N3X1 1017 aaPredicted RBP11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 CCDC138Q96M89 665 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 TM6SF1Q9BZW5 370 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 IFT122Q9HBG6 1241 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 MAD1L1Q9Y6D9 718 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 SCINQ9Y6U3 715 aa11.71□□□□□ -0.54
PKNOX1-201ENST00000291547 PHLPP2Q6ZVD8 1323 aa11.7□□□□□ -0.54
PKNOX1-201ENST00000291547 SLMAPQ14BN4 828 aa11.7□□□□□ -0.54
PKNOX1-201ENST00000291547 SLC35F6Q8N357 371 aa11.7□□□□□ -0.54
PKNOX1-201ENST00000291547 CD2APQ9Y5K6 639 aa11.7□□□□□ -0.54
PKNOX1-201ENST00000291547 ESYT2A0FGR8 921 aa11.7□□□□□ -0.54
PKNOX1-201ENST00000291547 CTNND1O60716 968 aaKnown RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms