RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ARMCX5Q6P1M9 558 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 C3orf67Q6ZVT6 689 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 DPH5Q9H2P9 285 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 CALCOCO1Q9P1Z2 691 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 PRDM4Q9UKN5 801 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 A0A1W2PRG0 241 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 USP17L10C9JJH3 530 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 ADCY1Q08828 1119 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 SLC9C1Q4G0N8 1177 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 ADGRA1Q86SQ6 560 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 METTL16Q86W50 562 aaKnown RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 PLA2G4DQ86XP0 818 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 IGDCC4Q8TDY8 1250 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 TIGD1Q96MW7 591 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 STK32BQ9NY57 414 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 TRIM10Q9UDY6 481 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 SERPINB13Q9UIV8 391 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 KDM6AO15550 1401 aaPredicted RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 FLOT1O75955 427 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 NEBLO76041 1014 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 PRPF6O94906 941 aaKnown RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 TTLL1O95922 423 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 KRT19P08727 400 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 ALDH1B1P30837 517 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 EAPPQ56P03 285 aaPredicted RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 FBXO38Q6PIJ6 1188 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 FAM133AQ8N9E0 248 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 VTI1AQ96AJ9 217 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 PTPN22Q9Y2R2 807 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 ATP6V0A2Q9Y487 856 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 SAR1BQ9Y6B6 198 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 HAUS3Q68CZ6 603 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 K7ENM7 598 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 TDP2O95551 362 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 KLK7P49862 253 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 TXNRD1Q16881 649 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 TMTC3Q6ZXV5 915 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 LARP4BQ92615 738 aaKnown RBP5.29□□□□□ -1.56
UBR1-201ENST00000290650 NOX5Q96PH1 765 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 HPS5Q9UPZ3 1129 aa5.29□□□□□ -1.56
UBR1-201ENST00000290650 GOLGA8IPA6NC78 632 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 GOLGA8JA6NMD2 632 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 CALUO43852 315 aaPredicted RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 BUB1BO60566 1050 aaPredicted RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 GH2P01242 217 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 TXNRD3Q86VQ6 643 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.28□□□□□ -1.56
UBR1-201ENST00000290650 METTL13Q8N6R0 699 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 FNBP1Q96RU3 617 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 CTTNBP2NLQ9P2B4 639 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 ANKFY1Q9P2R3 1169 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 PACSIN2Q9UNF0 486 aaPredicted RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 PRPF3O43395 683 aaKnown RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 SLFN14P0C7P3 912 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 VAV2P52735 878 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 IGBP1P78318 339 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 GRAPQ13588 217 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 ARHGEF16Q5VV41 709 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 VSTM4Q8IW00 320 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 NIM1KQ8IY84 436 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 GRAPLQ8TC17 118 aaPredicted RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 CCPG1Q9ULG6 757 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 HYOU1Q9Y4L1 999 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 LIFRP42702 1097 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 PTF1AQ7RTS3 328 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 TBC1D22AQ8WUA7 517 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 CD209Q9NNX6 404 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 ZCCHC17Q9NP64 241 aaKnown RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 DDX41Q9UJV9 622 aaKnown RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 USP32Q8NFA0 1604 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 XRCC5P13010 732 aaKnown RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 TNNI1P19237 187 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 PDE6BP35913 854 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 CFAP58Q5T655 872 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 PRAMEF18Q5VWM3 479 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 KRT27Q7Z3Y8 459 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 TMC4Q7Z404 712 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 SUGCTQ9HAC7 445 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 ANKRD26Q9UPS8 1709 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 SLURP2P0DP57 97 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 NR2F2P24468 414 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 RPL13P26373 211 aaKnown RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 LONP1P36776 959 aaKnown RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 SEPT2Q15019 361 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 IFI16Q16666 785 aaKnown RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 MIER3Q7Z3K6 550 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 PEX26Q7Z412 305 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 E9PMD0 336 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 CETN2P41208 172 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 XKR9Q5GH70 373 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 TCP11X2Q5H9J9 407 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 FAM26FQ5R3K3 315 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 ZNF658Q5TYW1 1059 aaPredicted RBP5.28□□□□□ -1.56
UBR1-201ENST00000290650 LRCH2Q5VUJ6 765 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 KAZNQ674X7 775 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 PPM1KQ8N3J5 372 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 FAM76AQ8TAV0 307 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 TSGA10Q9BZW7 698 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 DISC1Q9NRI5 854 aa5.28□□□□□ -1.56
UBR1-201ENST00000290650 ZNF277Q9NRM2 450 aaPredicted RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms