RNA–Protein interactions for RNA: ENST00000288986.6

NCK1-201, Transcript of NCK adaptor protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCK1, Length 1,937 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-201ENST00000288986 DTNBO60941 627 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 LARP1BQ659C4 914 aaKnown RBP17.7■□□□□ 0.42
NCK1-201ENST00000288986 SLC5A4Q9NY91 659 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 RBM27Q9P2N5 1060 aaKnown RBP17.7■□□□□ 0.42
NCK1-201ENST00000288986 MGAMO43451 1857 aa17.7■□□□□ 0.42
NCK1-201ENST00000288986 COBLO75128 1261 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 PKN2Q16513 984 aaKnown RBP17.69■□□□□ 0.42
NCK1-201ENST00000288986 RNF207Q6ZRF8 634 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 MCF2L2Q86YR7 1114 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 USP6NLQ92738 828 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 CYP39A1Q9NYL5 469 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 PTCH2Q9Y6C5 1203 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 MYH6P13533 1939 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 PFASO15067 1338 aa17.69■□□□□ 0.42
NCK1-201ENST00000288986 CFBP00751 764 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 SCG2P13521 617 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 FDPSP14324 419 aaKnown RBP17.68■□□□□ 0.42
NCK1-201ENST00000288986 CALML3P27482 149 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 BAATQ14032 418 aaPredicted RBP17.68■□□□□ 0.42
NCK1-201ENST00000288986 PFKFB3Q16875 520 aaPredicted RBP17.68■□□□□ 0.42
NCK1-201ENST00000288986 WWC2Q6AWC2 1192 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 TBC1D5Q92609 795 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 F13A1P00488 732 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 RPS6P62753 249 aaKnown RBP17.68■□□□□ 0.42
NCK1-201ENST00000288986 PKN1Q16512 942 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.68■□□□□ 0.42
NCK1-201ENST00000288986 APBA2Q99767 749 aa17.68■□□□□ 0.42
NCK1-201ENST00000288986 BRCA2P51587 3418 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 POTEB2H3BUK9 544 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 DEXIO95424 95 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 XRCC5P13010 732 aaKnown RBP17.67■□□□□ 0.42
NCK1-201ENST00000288986 NAPAP54920 295 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 IRF5Q13568 498 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 COL13A1Q5TAT6 717 aaPredicted RBP17.67■□□□□ 0.42
NCK1-201ENST00000288986 FBXO46Q6PJ61 603 aaPredicted RBP17.67■□□□□ 0.42
NCK1-201ENST00000288986 RGS22Q8NE09 1264 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 NPLOC4Q8TAT6 608 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 BARHL2Q9NY43 387 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 KIF3AQ9Y496 699 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 TCHHQ07283 1943 aa17.67■□□□□ 0.42
NCK1-201ENST00000288986 OPLAHO14841 1288 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 ADCY3O60266 1144 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 CNTN2Q02246 1040 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 SLC30A10Q6XR72 485 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 DNAJC25-GNG10A0A024R161 153 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 hCG_1984214I3L0E3 225 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 HOXC6P09630 235 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 ELNP15502 786 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 CCL14Q16627 93 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 ZNF792Q3KQV3 632 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 ZNF713Q8N859 430 aaPredicted RBP17.66■□□□□ 0.42
NCK1-201ENST00000288986 PURBQ96QR8 312 aaKnown RBP17.66■□□□□ 0.42
NCK1-201ENST00000288986 MCOLN1Q9GZU1 580 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 PSTPIP2Q9H939 334 aa17.66■□□□□ 0.42
NCK1-201ENST00000288986 PLXNB2O15031 1838 aa17.65■□□□□ 0.42
NCK1-201ENST00000288986 GCOM1H8Y6P7 765 aaPredicted RBP17.65■□□□□ 0.42
NCK1-201ENST00000288986 STXBP3O00186 592 aa17.65■□□□□ 0.42
NCK1-201ENST00000288986 POLR2MP0CAP2 368 aa17.65■□□□□ 0.42
NCK1-201ENST00000288986 PTMSP20962 102 aa17.65■□□□□ 0.42
NCK1-201ENST00000288986 HOXA13P31271 388 aaPredicted RBP17.65■□□□□ 0.42
NCK1-201ENST00000288986 GRK4P32298 578 aa17.65■□□□□ 0.42
NCK1-201ENST00000288986 FOXD4L5Q5VV16 416 aaPredicted RBP17.65■□□□□ 0.42
NCK1-201ENST00000288986 FOXD4L4Q8WXT5 416 aaPredicted RBP17.65■□□□□ 0.42
NCK1-201ENST00000288986 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
NCK1-201ENST00000288986 BIN2Q9UBW5 565 aaPredicted RBP17.65■□□□□ 0.42
NCK1-201ENST00000288986 DIS3Q9Y2L1 958 aaKnown RBP17.65■□□□□ 0.42
NCK1-201ENST00000288986 SLC9C1Q4G0N8 1177 aa17.64■□□□□ 0.42
NCK1-201ENST00000288986 TYW1BQ6NUM6 668 aa17.64■□□□□ 0.42
NCK1-201ENST00000288986 FAM184AQ8NB25 1140 aa17.64■□□□□ 0.42
NCK1-201ENST00000288986 PXYLP1Q8TE99 480 aa17.64■□□□□ 0.42
NCK1-201ENST00000288986 CCDC12Q8WUD4 166 aaPredicted RBP17.64■□□□□ 0.42
NCK1-201ENST00000288986 CUL5Q93034 780 aa17.64■□□□□ 0.42
NCK1-201ENST00000288986 MAML3Q96JK9 1138 aa17.64■□□□□ 0.42
NCK1-201ENST00000288986 SMCO2A6NFE2 343 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 USP17L6PQ6QN14 398 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 FAM133AQ8N9E0 248 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 SLAIN1Q8ND83 568 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 SYTL5Q8TDW5 730 aaPredicted RBP17.64■□□□□ 0.41
NCK1-201ENST00000288986 SH3TC2Q8TF17 1288 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 TRIB2Q92519 343 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 AIFM3Q96NN9 605 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 MAF1Q9H063 256 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 MAP3K20Q9NYL2 800 aaKnown RBP17.64■□□□□ 0.41
NCK1-201ENST00000288986 FLRT1Q9NZU1 646 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 VPS54Q9P1Q0 977 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 STK36Q9NRP7 1315 aa17.64■□□□□ 0.41
NCK1-201ENST00000288986 VPS37CA5D8V6 355 aaPredicted RBP17.63■□□□□ 0.41
NCK1-201ENST00000288986 GOLGA6L22H0YM25 854 aa17.63■□□□□ 0.41
NCK1-201ENST00000288986 HSD17B4P51659 736 aa17.63■□□□□ 0.41
NCK1-201ENST00000288986 PPP1R18Q6NYC8 613 aa17.63■□□□□ 0.41
NCK1-201ENST00000288986 TRMT44Q8IYL2 757 aaKnown RBP17.63■□□□□ 0.41
NCK1-201ENST00000288986 SAMD3Q8N6K7 520 aa17.63■□□□□ 0.41
NCK1-201ENST00000288986 WASF1Q92558 559 aa17.63■□□□□ 0.41
NCK1-201ENST00000288986 ADD3Q9UEY8 706 aaKnown RBP17.63■□□□□ 0.41
NCK1-201ENST00000288986 ATP6V1DQ9Y5K8 247 aa17.63■□□□□ 0.41
NCK1-201ENST00000288986 ZNFX1Q9P2E3 1918 aaKnown RBP17.63■□□□□ 0.41
NCK1-201ENST00000288986 MYH15Q9Y2K3 1946 aa17.63■□□□□ 0.41
NCK1-201ENST00000288986 SOWAHBA6NEL2 793 aa17.62■□□□□ 0.41
NCK1-201ENST00000288986 MRPL12P52815 198 aaKnown RBP17.62■□□□□ 0.41
NCK1-201ENST00000288986 FCHSD1Q86WN1 690 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms