RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 PLCG1P19174 1290 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 SEMA3FQ13275 785 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 MOXD1Q6UVY6 613 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 MICALL2Q8IY33 904 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 SPICE1Q8N0Z3 855 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 NLGN2Q8NFZ4 835 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 FANCLQ9NW38 375 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 RMND1Q9NWS8 449 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 SYNRGQ9UMZ2 1314 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 CYP3A7-CYP3A51PA0A087WV96 503 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L15C9J2P7 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L13C9JLJ4 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L11C9JVI0 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L18D6R9N7 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L22D6RA61 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L17D6RBQ6 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L19D6RCP7 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L20D6RJB6 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 OPLAHO14841 1288 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 RPN1P04843 607 aaKnown RBP11.48□□□□□ -0.57
C9orf43-201ENST00000288462 CYP3A7P24462 503 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 TECP42680 631 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 SNAP25P60880 206 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L24Q0WX57 530 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 IKQ13123 557 aaPredicted RBP11.48□□□□□ -0.57
C9orf43-201ENST00000288462 TMEM266Q2M3C6 531 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 FAM83BQ5T0W9 1011 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 USP17L6PQ6QN14 398 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 TRMT44Q8IYL2 757 aaKnown RBP11.48□□□□□ -0.57
C9orf43-201ENST00000288462 RASSF8Q8NHQ8 419 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 KIAA1524Q8TCG1 905 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 UPF1Q92900 1129 aaKnown RBP eCLIP11.48□□□□□ -0.57
C9orf43-201ENST00000288462 RANBP17Q9H2T7 1088 aaKnown RBP11.48□□□□□ -0.57
C9orf43-201ENST00000288462 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.48□□□□□ -0.57
C9orf43-201ENST00000288462 IMPACTQ9P2X3 320 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 DDX25Q9UHL0 483 aaKnown RBP11.48□□□□□ -0.57
C9orf43-201ENST00000288462 PYCARDQ9ULZ3 195 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 NFE2L3Q9Y4A8 694 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 ZNF541Q9H0D2 1346 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 PARP14Q460N5 1801 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 SBF1O95248 1867 aa11.48□□□□□ -0.57
C9orf43-201ENST00000288462 SMCHD1A6NHR9 2005 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 PSDA5PKW4 1024 aaPredicted RBP11.47□□□□□ -0.57
C9orf43-201ENST00000288462 CBFA2T2O43439 604 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 TXKP42681 527 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 USP11P51784 963 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 TRAF1Q13077 416 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 PDIA5Q14554 519 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 KCNB1Q14721 858 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 ZNF658Q5TYW1 1059 aaPredicted RBP11.47□□□□□ -0.57
C9orf43-201ENST00000288462 HAS1Q92839 578 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 P2RX7Q99572 595 aaKnown RBP11.47□□□□□ -0.57
C9orf43-201ENST00000288462 GINM1Q9NU53 330 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 SPTLC3Q9NUV7 552 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 PIK3CDO00329 1044 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 OFD1O75665 1012 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 FOSP01100 380 aaPredicted RBP11.47□□□□□ -0.57
C9orf43-201ENST00000288462 LRMPQ12912 555 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 CACTINQ8WUQ7 758 aaKnown RBP11.47□□□□□ -0.57
C9orf43-201ENST00000288462 RAB34Q9BZG1 259 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 STK17AQ9UEE5 414 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 LRWD1Q9UFC0 647 aa11.47□□□□□ -0.57
C9orf43-201ENST00000288462 KLRC4O43908 158 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 SREBF1P36956 1147 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 GSDMDP57764 484 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 GRB10Q13322 594 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 KIF4BQ2VIQ3 1234 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 USH1GQ495M9 461 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 SPATA1Q5VX52 437 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 SAMD7Q7Z3H4 446 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 FAM160B2Q86V87 743 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.57
C9orf43-201ENST00000288462 CHURC1Q8WUH1 139 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 CALML4Q96GE6 196 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 PNMA5Q96PV4 448 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 GLIS2Q9BZE0 524 aaPredicted RBP11.46□□□□□ -0.57
C9orf43-201ENST00000288462 KCNMB3Q9NPA1 279 aa11.46□□□□□ -0.57
C9orf43-201ENST00000288462 CNOT7Q9UIV1 285 aaKnown RBP11.46□□□□□ -0.57
C9orf43-201ENST00000288462 ASTN2O75129 1339 aaPredicted RBP11.45□□□□□ -0.58
C9orf43-201ENST00000288462 POTEMA6NI47 508 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 SERPINC1P01008 464 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 TAL1P17542 331 aaPredicted RBP11.45□□□□□ -0.58
C9orf43-201ENST00000288462 UBASH3AP57075 661 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 TMEM119Q4V9L6 283 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 CDKAL1Q5VV42 579 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
C9orf43-201ENST00000288462 LRRC8AQ8IWT6 810 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 C7orf25Q9BPX7 421 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 INTS13Q9NVM9 706 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 HACL1Q9UJ83 578 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 FEM1BQ9UK73 627 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 GJA3Q9Y6H8 435 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 PHIPQ8WWQ0 1821 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 SLC26A4O43511 780 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 RHOBTB3O94955 611 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 ARHGAP4P98171 946 aa11.45□□□□□ -0.58
C9orf43-201ENST00000288462 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
C9orf43-201ENST00000288462 FILIP1Q7Z7B0 1213 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms