RNA–Protein interactions for RNA: ENST00000287437.7

NSMCE2-201, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE2, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-201ENST00000287437 SEZ6LQ9BYH1 1024 aa12.76□□□□□ -0.37
NSMCE2-201ENST00000287437 CERS4Q9HA82 394 aa12.76□□□□□ -0.37
NSMCE2-201ENST00000287437 CYP39A1Q9NYL5 469 aa12.76□□□□□ -0.37
NSMCE2-201ENST00000287437 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 PDE4BQ07343 736 aa12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 AAK1Q2M2I8 961 aa12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 TMEM67Q5HYA8 995 aa12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 SEC62Q99442 399 aaKnown RBP12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 Q9Y3F1 56 aa12.75□□□□□ -0.37
NSMCE2-201ENST00000287437 TNKSO95271 1327 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 BDP1A6H8Y1 2624 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 EPOPA6NHQ4 379 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 ERC2O15083 957 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 PFKMP08237 780 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 KRT40Q6A162 431 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 PPP1R13LQ8WUF5 828 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 C1QTNF1Q9BXJ1 281 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 CCPG1Q9ULG6 757 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 PRR12Q9ULL5 1215 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 STX8Q9UNK0 236 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 MTMR7Q9Y216 660 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 MTCH2Q9Y6C9 303 aa12.74□□□□□ -0.37
NSMCE2-201ENST00000287437 TCF20Q9UGU0 1960 aaKnown RBP12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 GTPBP6O43824 516 aaPredicted RBP12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 NMT2O60551 498 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 PLA2G6O60733 806 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 ARHGEF15O94989 841 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 SLC3A2P08195 630 aaKnown RBP12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 MYL3P08590 195 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 PURAQ00577 322 aaKnown RBP12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 PPARAQ07869 468 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 RCSD1Q6JBY9 416 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 MORC4Q8TE76 937 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 NACAP1Q9BZK3 213 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 NAPBQ9H115 298 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 CHMP4BQ9H444 224 aaKnown RBP12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 POLR3EQ9NVU0 708 aa12.73□□□□□ -0.37
NSMCE2-201ENST00000287437 LCTP09848 1927 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 TSPY2A6NKD2 308 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 ICAM1P05362 532 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 POU3F3P20264 500 aaPredicted RBP12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 ALDH5A1P51649 535 aaPredicted RBP12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 BAATQ14032 418 aaPredicted RBP12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 FAM47CQ5HY64 1035 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 ARNTL2Q8WYA1 636 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 WDR11Q9BZH6 1224 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 EPHX3Q9H6B9 360 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 INCENPQ9NQS7 918 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 TRANK1O15050 2925 aa12.72□□□□□ -0.37
NSMCE2-201ENST00000287437 NCOR1O75376 2440 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 HAX1O00165 279 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 NFIBO00712 420 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 ACTN1P12814 892 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 SLC16A2P36021 539 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 CPT1AP50416 773 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 TAP1Q03518 808 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 CTDSPL2Q05D32 466 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 CCDC96Q2M329 555 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 NBPF20Q3BBV1 942 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 SLC9A7Q96T83 725 aa12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 GPHNQ9NQX3 736 aaPredicted RBP12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 ADD3Q9UEY8 706 aaKnown RBP12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.71□□□□□ -0.37
NSMCE2-201ENST00000287437 PTPDC1A2A3K4 754 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 FXR2P51116 673 aaKnown RBP eCLIP12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 PPP4R3BQ5MIZ7 849 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 C20orf194Q5TEA3 1177 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 TTBK2Q6IQ55 1244 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 SLC30A10Q6XR72 485 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 SPRED2Q7Z698 418 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 HERC6Q8IVU3 1022 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 LRFN3Q9BTN0 628 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 FTOQ9C0B1 505 aaKnown RBP eCLIP12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 RANBP17Q9H2T7 1088 aaKnown RBP12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 COG5Q9UP83 839 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 SCN5AQ14524 2016 aa12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 PRRC2BQ5JSZ5 2229 aaKnown RBP12.7□□□□□ -0.38
NSMCE2-201ENST00000287437 RBM47A0AV96 593 aaKnown RBP12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 FOXP2O15409 715 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 TLL1O43897 1013 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 RANBP6O60518 1105 aaKnown RBP12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 IQCF3P0C7M6 154 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 CALML3P27482 149 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 RFC2P35250 354 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 GRB10Q13322 594 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 LRRFIP1Q32MZ4 808 aaKnown RBP12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 ZMYM1Q5SVZ6 1142 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 RETREG2Q8NC44 543 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 PHOSPHO2Q8TCD6 241 aa12.69□□□□□ -0.38
NSMCE2-201ENST00000287437 COPS5Q92905 334 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms