RNA–Protein interactions for RNA: ENST00000285679.10

USP25-201, Transcript of ubiquitin specific peptidase 25, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP25, Length 3,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-201ENST00000285679 KIAA0753Q2KHM9 967 aa16.94■□□□□ 0.3
USP25-201ENST00000285679 NIP7Q9Y221 180 aaKnown RBP eCLIP16.94■□□□□ 0.3
USP25-201ENST00000285679 FGFR1OPO95684 399 aaKnown RBP16.93■□□□□ 0.3
USP25-201ENST00000285679 TNNC1P63316 161 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 P2RX5Q93086 422 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 ACSBG1Q96GR2 724 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 TFCP2L1Q9NZI6 479 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 RIPOR2Q9Y4F9 1068 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 WDR19Q8NEZ3 1342 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 PCDH11XQ9BZA7 1347 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 PCDH11YQ9BZA8 1340 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 IL2RBP14784 551 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 POLR2FP61218 127 aaKnown RBP16.93■□□□□ 0.3
USP25-201ENST00000285679 DISC1Q9NRI5 854 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 PLCG1P19174 1290 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 CARSP49589 748 aaKnown RBP16.93■□□□□ 0.3
USP25-201ENST00000285679 TFAP4Q01664 338 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 NLRP10Q86W26 655 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 ARFGAP2Q8N6H7 521 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 OR2W6PQ8NHA6 318 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 CRNKL1Q9BZJ0 848 aaKnown RBP16.93■□□□□ 0.3
USP25-201ENST00000285679 VIPAS39Q9H9C1 493 aa16.93■□□□□ 0.3
USP25-201ENST00000285679 TNS3Q68CZ2 1445 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 RCCD1A6NED2 376 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 PSMD14O00487 310 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 N4BP2L2Q92802 583 aaPredicted RBP16.92■□□□□ 0.3
USP25-201ENST00000285679 ZIM3Q96PE6 472 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 UBXN6Q9BZV1 441 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 RBM12Q9NTZ6 932 aaKnown RBP16.92■□□□□ 0.3
USP25-201ENST00000285679 EIF6P56537 245 aaKnown RBP16.92■□□□□ 0.3
USP25-201ENST00000285679 SLC9C1Q4G0N8 1177 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 CCDC152Q4G0S7 254 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 SV2BQ7L1I2 683 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 AP1M1Q9BXS5 423 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 CXorf56Q9H5V9 222 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 SPATA31A3Q5VYP0 1347 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 TNNI2P48788 182 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 MAP2K1Q02750 393 aaPredicted RBP16.92■□□□□ 0.3
USP25-201ENST00000285679 TMEM266Q2M3C6 531 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 SAP30BPQ9UHR5 308 aaKnown RBP16.92■□□□□ 0.3
USP25-201ENST00000285679 SNX12Q9UMY4 172 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 ZBTB1Q9Y2K1 713 aa16.92■□□□□ 0.3
USP25-201ENST00000285679 BUB1BO60566 1050 aaPredicted RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 CAPN11Q9UMQ6 739 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 LRRC53A6NM62 1247 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 NEBLO76041 1014 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 VIMP08670 466 aaKnown RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 CACNB1Q02641 598 aaPredicted RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 KLHL30Q0D2K2 578 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 PPP1R7Q15435 360 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 DCAF17Q5H9S7 520 aaPredicted RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 GIGYF2Q6Y7W6 1299 aaKnown RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 BRINP3Q76B58 766 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 CCDC25Q86WR0 208 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 FNBP4Q8N3X1 1017 aaPredicted RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 TACO1Q9BSH4 297 aaKnown RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 GOLPH3Q9H4A6 298 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 STAG1Q8WVM7 1258 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 ODF2LQ9ULJ1 636 aa16.91■□□□□ 0.3
USP25-201ENST00000285679 REXO2Q9Y3B8 237 aaKnown RBP16.91■□□□□ 0.3
USP25-201ENST00000285679 PRPF3O43395 683 aaKnown RBP16.9■□□□□ 0.3
USP25-201ENST00000285679 CLTAP09496 248 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 KRT13P13646 458 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 NT5DC1Q5TFE4 455 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 ANKRD40Q6AI12 368 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 CNNM4Q6P4Q7 775 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 BIN2Q9UBW5 565 aaPredicted RBP16.9■□□□□ 0.3
USP25-201ENST00000285679 ADAMTS1Q9UHI8 967 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 CYP2D6P10635 497 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 KIRREL3Q8IZU9 778 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 RNPC3Q96LT9 517 aaKnown RBP16.9■□□□□ 0.3
USP25-201ENST00000285679 PLAAQ9Y263 795 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 ITIH6Q6UXX5 1313 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 ZNF335Q9H4Z2 1342 aaPredicted RBP16.9■□□□□ 0.3
USP25-201ENST00000285679 LONP1P36776 959 aaKnown RBP16.9■□□□□ 0.3
USP25-201ENST00000285679 ATP2C1P98194 919 aaPredicted RBP16.9■□□□□ 0.3
USP25-201ENST00000285679 CCDC155Q8N6L0 562 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 TBC1D5Q92609 795 aa16.9■□□□□ 0.3
USP25-201ENST00000285679 LSM14BQ9BX40 385 aaKnown RBP16.9■□□□□ 0.3
USP25-201ENST00000285679 VEGFAP15692 232 aaPredicted RBP16.89■□□□□ 0.3
USP25-201ENST00000285679 IFNAR2P48551 515 aa16.89■□□□□ 0.3
USP25-201ENST00000285679 STK4Q13043 487 aa16.89■□□□□ 0.3
USP25-201ENST00000285679 CCDC170Q8IYT3 715 aa16.89■□□□□ 0.3
USP25-201ENST00000285679 SRBD1Q8N5C6 995 aaKnown RBP16.89■□□□□ 0.3
USP25-201ENST00000285679 RPS6KA1Q15418 735 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 TSEN2Q8NCE0 465 aaKnown RBP16.89■□□□□ 0.29
USP25-201ENST00000285679 PNMA1Q8ND90 353 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 TCP11Q8WWU5 503 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 SLC1A4P43007 532 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 SFMBT2Q5VUG0 894 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 EMBQ6PCB8 327 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 DAAM2Q86T65 1068 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 NDST4Q9H3R1 872 aa16.89■□□□□ 0.29
USP25-201ENST00000285679 PALMO75781 387 aa16.88■□□□□ 0.29
USP25-201ENST00000285679 CCNE1P24864 410 aa16.88■□□□□ 0.29
USP25-201ENST00000285679 PEX19P40855 299 aa16.88■□□□□ 0.29
USP25-201ENST00000285679 CCDC84Q86UT8 332 aaPredicted RBP16.88■□□□□ 0.29
USP25-201ENST00000285679 FBXL16Q8N461 479 aa16.88■□□□□ 0.29
USP25-201ENST00000285679 PHF20Q9BVI0 1012 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms