RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 NFIBO00712 420 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 CNMDO75829 334 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 CEBPZQ03701 1054 aaKnown RBP21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 AP3B2Q13367 1082 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 MUM1L1Q5H9M0 696 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 SAMD3Q8N6K7 520 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 SMCR8Q8TEV9 937 aaPredicted RBP21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 TBC1D5Q92609 795 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 SPATC1LQ9H0A9 340 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 RNF146Q9NTX7 359 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 FOSP01100 380 aaPredicted RBP21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 HOXA13P31271 388 aaPredicted RBP21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 NASPP49321 788 aaPredicted RBP21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 GHRHRQ02643 423 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 INF2Q27J81 1249 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 ANO1Q5XXA6 986 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 RIOX2Q8IUF8 465 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 PAGR1Q9BTK6 254 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 ZCCHC17Q9NP64 241 aaKnown RBP21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 MAP3K20Q9NYL2 800 aaKnown RBP21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 CLIC4Q9Y696 253 aa21.59■■□□□ 1.05
PDLIM3-202ENST00000284770 PEX10O60683 326 aa21.58■■□□□ 1.04
PDLIM3-202ENST00000284770 HSD17B4P51659 736 aa21.58■■□□□ 1.04
PDLIM3-202ENST00000284770 SKOR2Q2VWA4 1001 aaPredicted RBP21.58■■□□□ 1.04
PDLIM3-202ENST00000284770 TBCKQ8TEA7 893 aa21.58■■□□□ 1.04
PDLIM3-202ENST00000284770 PGBD1Q96JS3 809 aa21.58■■□□□ 1.04
PDLIM3-202ENST00000284770 PARK7Q99497 189 aaKnown RBP21.58■■□□□ 1.04
PDLIM3-202ENST00000284770 TXNRD2Q9NNW7 524 aa21.58■■□□□ 1.04
PDLIM3-202ENST00000284770 ELP1O95163 1332 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 RASSF10A6NK89 507 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 SPDYE3A6NKU9 549 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 ATP2B1P20020 1258 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 SF3A1Q15459 793 aaKnown RBP21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 CSPP1Q1MSJ5 1256 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 PAXIP1Q6ZW49 1069 aaPredicted RBP21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 CHST13Q8NET6 341 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 LEO1Q8WVC0 666 aaPredicted RBP21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 SPATA32Q96LK8 384 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 MAF1Q9H063 256 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 RCOR1Q9UKL0 485 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 PCDHB6Q9Y5E3 794 aa21.57■■□□□ 1.04
PDLIM3-202ENST00000284770 IGF2BP3O00425 579 aaKnown RBP eCLIP21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 YEATS4O95619 227 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 GCLCP48506 637 aaPredicted RBP21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 SREBF2Q12772 1141 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 DEFB115Q30KQ5 88 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 TTC38Q5R3I4 469 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 CYP4F22Q6NT55 531 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 LINC00301Q8NCQ3 95 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 ANO3Q9BYT9 981 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 ACAD9Q9H845 621 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 GADD45BO75293 160 aaPredicted RBP21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 KLHL40Q2TBA0 621 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 NEK8Q86SG6 692 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 IFNL1Q8IU54 200 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 GPT2Q8TD30 523 aa21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 MOV10L1Q9BXT6 1211 aaKnown RBP21.56■■□□□ 1.04
PDLIM3-202ENST00000284770 WNT7AO00755 349 aa21.55■■□□□ 1.04
PDLIM3-202ENST00000284770 SLC25A27O95847 323 aa21.55■■□□□ 1.04
PDLIM3-202ENST00000284770 Q3C1V9 767 aa21.55■■□□□ 1.04
PDLIM3-202ENST00000284770 RNF207Q6ZRF8 634 aa21.55■■□□□ 1.04
PDLIM3-202ENST00000284770 FCHSD1Q86WN1 690 aa21.55■■□□□ 1.04
PDLIM3-202ENST00000284770 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.55■■□□□ 1.04
PDLIM3-202ENST00000284770 FBXO40Q9UH90 709 aa21.55■■□□□ 1.04
PDLIM3-202ENST00000284770 COPB2P35606 906 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 TM4SF4P48230 202 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 RPS6P62753 249 aaKnown RBP21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 ERVK-9P63128 1117 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 ERVK-24P63145 666 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 SLC39A14Q15043 492 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 STK38Q15208 465 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 PTPAQ15257 358 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 CEP131Q9UPN4 1083 aa21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 DDX49Q9Y6V7 483 aaKnown RBP21.54■■□□□ 1.04
PDLIM3-202ENST00000284770 NOGQ13253 232 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 GRM1Q13255 1194 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 ZNF174Q15697 407 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 NSMFQ6X4W1 530 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 GPRC5AQ8NFJ5 357 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 KCNG4Q8TDN1 519 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 USP11P51784 963 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 LETM2Q2VYF4 491 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 NCAPG2Q86XI2 1143 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 ANKRD13CQ8N6S4 541 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 SYTL5Q8TDW5 730 aaPredicted RBP21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 CRYGNQ8WXF5 182 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 ZIC5Q96T25 663 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 MORF4L1Q9UBU8 362 aa21.53■■□□□ 1.04
PDLIM3-202ENST00000284770 SPTLC2O15270 562 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 EDIL3O43854 480 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 BMP15O95972 392 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 ERCC3P19447 782 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 MCM7P33993 719 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 SREBF1P36956 1147 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 UBE2HP62256 183 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 BAATQ14032 418 aaPredicted RBP21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 CAPNS2Q96L46 248 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 EHMT1Q9H9B1 1298 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 COL20A1Q9P218 1284 aa21.52■■□□□ 1.04
PDLIM3-202ENST00000284770 CCNT1O60563 726 aaKnown RBP21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms