RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 LONP1P36776 959 aaKnown RBP17.45■□□□□ 0.38
COPS3-201ENST00000268717 STAT2P52630 851 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 INF2Q27J81 1249 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 KANK3Q6NY19 840 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 ERO1BQ86YB8 467 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 OTUD5Q96G74 571 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 CCDC34Q96HJ3 373 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 PPP1R9BQ96SB3 815 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 AMNQ9BXJ7 453 aa17.45■□□□□ 0.38
COPS3-201ENST00000268717 TMEM232C9JQI7 657 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 RAD21O60216 631 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 MCM7P33993 719 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 GRIN1Q05586 938 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 NOL9Q5SY16 702 aaKnown RBP17.44■□□□□ 0.38
COPS3-201ENST00000268717 KRBA2Q6ZNG9 492 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 FAM160B2Q86V87 743 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 RNF214Q8ND24 703 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 ACER1Q8TDN7 264 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 CHURC1Q8WUH1 139 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 ANO10Q9NW15 660 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 DOCK1Q14185 1865 aa17.44■□□□□ 0.38
COPS3-201ENST00000268717 TESPA1A2RU30 521 aaPredicted RBP17.43■□□□□ 0.38
COPS3-201ENST00000268717 IFNL1Q8IU54 200 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 TNS4Q8IZW8 715 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 LPAR1Q92633 364 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 MS4A4AQ96JQ5 239 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 NAP1L4Q99733 375 aaKnown RBP17.43■□□□□ 0.38
COPS3-201ENST00000268717 TUBE1Q9UJT0 475 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 IGF2BP3O00425 579 aaKnown RBP eCLIP17.43■□□□□ 0.38
COPS3-201ENST00000268717 ALDH1A1P00352 501 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 PPATQ06203 517 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 FBXO11Q86XK2 927 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 CNNM3Q8NE01 707 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 TBCKQ8TEA7 893 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 PDLIM2Q96JY6 352 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 CFHR5Q9BXR6 569 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 PSTPIP2Q9H939 334 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 FEM1BQ9UK73 627 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 PCDHA1Q9Y5I3 950 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 ATAD5Q96QE3 1844 aa17.43■□□□□ 0.38
COPS3-201ENST00000268717 PHIPQ8WWQ0 1821 aa17.42■□□□□ 0.38
COPS3-201ENST00000268717 GTF2A2P52657 109 aa17.42■□□□□ 0.38
COPS3-201ENST00000268717 IKQ13123 557 aaPredicted RBP17.42■□□□□ 0.38
COPS3-201ENST00000268717 PPIL2Q13356 520 aa17.42■□□□□ 0.38
COPS3-201ENST00000268717 AP3B2Q13367 1082 aa17.42■□□□□ 0.38
COPS3-201ENST00000268717 ANO6Q4KMQ2 910 aa17.42■□□□□ 0.38
COPS3-201ENST00000268717 NUP88Q99567 741 aaPredicted RBP17.42■□□□□ 0.38
COPS3-201ENST00000268717 KIAA1683Q9H0B3 1180 aa17.42■□□□□ 0.38
COPS3-201ENST00000268717 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.42■□□□□ 0.38
COPS3-201ENST00000268717 BIN2Q9UBW5 565 aaPredicted RBP17.42■□□□□ 0.38
COPS3-201ENST00000268717 PRR12Q9ULL5 1215 aa17.42■□□□□ 0.38
COPS3-201ENST00000268717 VWA3AA6NCI4 1184 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 IRF6O14896 467 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 TBC1D8O95759 1140 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 GCFC2P16383 781 aaKnown RBP17.41■□□□□ 0.38
COPS3-201ENST00000268717 ZRSR1Q15695 479 aaKnown RBP17.41■□□□□ 0.38
COPS3-201ENST00000268717 LONRF3Q496Y0 759 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 PPP4R3AQ6IN85 833 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 DTHD1Q6ZMT9 781 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 SYMPKQ92797 1274 aaKnown RBP17.41■□□□□ 0.38
COPS3-201ENST00000268717 AK8Q96MA6 479 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 PTPN18Q99952 460 aa17.41■□□□□ 0.38
COPS3-201ENST00000268717 PTPRFP10586 1907 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 CCL15-CCL14A0A0B4J2E2 113 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 POLR2DO15514 142 aaKnown RBP17.4■□□□□ 0.38
COPS3-201ENST00000268717 ACTN4O43707 911 aaKnown RBP17.4■□□□□ 0.38
COPS3-201ENST00000268717 NEMFO60524 1076 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 CCL15Q16663 113 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 KIAA1755Q5JYT7 1200 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 FAM83BQ5T0W9 1011 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 JAKMIP3Q5VZ66 844 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 SCYL3Q8IZE3 742 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 BRI3BPQ8WY22 251 aa17.4■□□□□ 0.38
COPS3-201ENST00000268717 NAT10Q9H0A0 1025 aaKnown RBP17.4■□□□□ 0.38
COPS3-201ENST00000268717 RANBP17Q9H2T7 1088 aaKnown RBP17.4■□□□□ 0.38
COPS3-201ENST00000268717 WDR46O15213 610 aaKnown RBP17.39■□□□□ 0.38
COPS3-201ENST00000268717 CCNT1O60563 726 aaKnown RBP17.39■□□□□ 0.38
COPS3-201ENST00000268717 OR52Z1P0C646 297 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 SLFN14P0C7P3 912 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 TXLNAP40222 546 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 ZNF165P49910 485 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 MDM2Q00987 491 aaPredicted RBP17.39■□□□□ 0.38
COPS3-201ENST00000268717 LETM2Q2VYF4 491 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 SPECC1Q5M775 1068 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 NT5DC1Q5TFE4 455 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 CEP57L1Q8IYX8 460 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 SPICE1Q8N0Z3 855 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 BPIFA3Q9BQP9 254 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 WDR18Q9BV38 432 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 CBX8Q9HC52 389 aa17.39■□□□□ 0.38
COPS3-201ENST00000268717 FOSP01100 380 aaPredicted RBP17.39■□□□□ 0.37
COPS3-201ENST00000268717 USP14P54578 494 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 NLRP12P59046 1061 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 SNAPC2Q13487 334 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 IL17AQ16552 155 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 MOXD1Q6UVY6 613 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 EPSTI1Q96J88 318 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 DNAJC25Q9H1X3 360 aa17.39■□□□□ 0.37
COPS3-201ENST00000268717 TMEM60Q9H2L4 133 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms