RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 GRAMD1CQ8IYS0 662 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 IQUBQ8NA54 791 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 PITPNM2Q9BZ72 1349 aa23.27■■□□□ 1.32
LYSMD2-201ENST00000267838 GOLGA6L6A8MZA4 724 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 SLC37A4O43826 429 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 TAL1P17542 331 aaPredicted RBP23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 CALCRLQ16602 461 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 SH3RF1Q7Z6J0 888 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 PAGE5Q96GU1 130 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 AK8Q96MA6 479 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 MTMR9Q96QG7 549 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 WRNIP1Q96S55 665 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 ANO3Q9BYT9 981 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 FBXO28Q9NVF7 368 aa23.26■■□□□ 1.31
LYSMD2-201ENST00000267838 AP5Z1O43299 807 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 CDC25AP30304 524 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 PLCB2Q00722 1185 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 NT5DC1Q5TFE4 455 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 ISM2Q6H9L7 571 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 CCDC174Q6PII3 467 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 DHX40Q8IX18 779 aaKnown RBP23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 SMARCE1Q969G3 411 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 NAP1L4Q99733 375 aaKnown RBP23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 BPIFA3Q9BQP9 254 aa23.25■■□□□ 1.31
LYSMD2-201ENST00000267838 GOLGA6L19H0YKK7 550 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 OPLAHO14841 1288 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 GCFC2P16383 781 aaKnown RBP23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 SARSP49591 514 aaKnown RBP23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 ZKSCAN4Q969J2 545 aaPredicted RBP23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 CCSER1Q9C0I3 900 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 SSC5DA1L4H1 1573 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 POLR2AP24928 1970 aaKnown RBP23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 PP2D1A8MPX8 630 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 BECN2A8MW95 431 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 UBA7P41226 1012 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 AFMP43652 599 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 SUPT20HL1Q3ZLR7 823 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 MTERF4Q7Z6M4 381 aaKnown RBP23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 WDR18Q9BV38 432 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 AS3MTQ9HBK9 375 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 PICK1Q9NRD5 415 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 FZD1Q9UP38 647 aa23.24■■□□□ 1.31
LYSMD2-201ENST00000267838 FOSP01100 380 aaPredicted RBP23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 USP11P51784 963 aa23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 MTMR2Q13614 643 aa23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 KARSQ15046 597 aaKnown RBP23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 PDXDC2PQ6P474 469 aa23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 TEX2Q8IWB9 1127 aa23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 SPATA20Q8TB22 786 aa23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 DISC1Q9NRI5 854 aa23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 DDX25Q9UHL0 483 aaKnown RBP23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 MAN1B1Q9UKM7 699 aa23.23■■□□□ 1.31
LYSMD2-201ENST00000267838 SMC2O95347 1197 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 PTPRAP18433 802 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 TECP42680 631 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 TXKP42681 527 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 USP14P54578 494 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 AOPEPQ8N6M6 819 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 KLRG1Q96E93 195 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 PRIMPOLQ96LW4 560 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 P2RX7Q99572 595 aaKnown RBP23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 SLF1Q9BQI6 1058 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 SPDYE3A6NKU9 549 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 PIK3CDO00329 1044 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 STAT6P42226 847 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 SPP2Q13103 211 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 DGKZQ13574 1117 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 IGSF22Q8N9C0 903 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 TRIML1Q8N9V2 468 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 EMILIN3Q9NT22 766 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 SMCHD1A6NHR9 2005 aa23.22■■□□□ 1.31
LYSMD2-201ENST00000267838 FXR2P51116 673 aaKnown RBP eCLIP23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 NOLC1Q14978 699 aaKnown RBP eCLIP23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 TMEM266Q2M3C6 531 aa23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 CABP7Q86V35 215 aa23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 PRPF38AQ8NAV1 312 aaKnown RBP23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 RASSF8Q8NHQ8 419 aa23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 CRYGNQ8WXF5 182 aa23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 SPTLC3Q9NUV7 552 aa23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 MRPL11Q9Y3B7 192 aaKnown RBP23.21■■□□□ 1.31
LYSMD2-201ENST00000267838 ABCB11O95342 1321 aa23.2■■□□□ 1.31
LYSMD2-201ENST00000267838 VCAM1P19320 739 aa23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 BACE1P56817 501 aa23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 DPYDQ12882 1025 aa23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 MORC3Q14149 939 aa23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 RRAGBQ5VZM2 374 aa23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 MOXD1Q6UVY6 613 aa23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 ZNF280CQ8ND82 737 aa23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 DCPSQ96C86 337 aaKnown RBP23.2■■□□□ 1.3
LYSMD2-201ENST00000267838 PHIPQ8WWQ0 1821 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 CYP3A7-CYP3A51PA0A087WV96 503 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 BMP6P22004 513 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 CYP3A7P24462 503 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 HOXA13P31271 388 aaPredicted RBP23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 ARHGAP4P98171 946 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 DNTTIP2Q5QJE6 756 aaKnown RBP23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 DPY19L2Q6NUT2 758 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 LDHDQ86WU2 507 aa23.19■■□□□ 1.3
LYSMD2-201ENST00000267838 TANGO6Q9C0B7 1094 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms