RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 RRAGCQ9HB90 399 aa14.48□□□□□ -0.09
CPSF6-201ENST00000266679 DDX4Q9NQI0 724 aaKnown RBP14.48□□□□□ -0.09
CPSF6-201ENST00000266679 ABHD10Q9NUJ1 306 aa14.48□□□□□ -0.09
CPSF6-201ENST00000266679 MYH4Q9Y623 1939 aa14.48□□□□□ -0.09
CPSF6-201ENST00000266679 RHOBTB3O94955 611 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 NOVP48745 357 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 ERVK-24P63145 666 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 SP8Q8IXZ3 490 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 CERS5Q8N5B7 392 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 AK8Q96MA6 479 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 MTMR4Q9NYA4 1195 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 MRFAP1Q9Y605 127 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 PSMA7O14818 248 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 MYL1P05976 194 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 SMARCA1P28370 1054 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 SCNN1DP51172 638 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 ADCY7P51828 1080 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 ASIC1P78348 528 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 MAP3K9P80192 1104 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 PPP2R3AQ06190 1150 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 TRIM14Q14142 442 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 DOK7Q18PE1 504 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 STYK1Q6J9G0 422 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 GIMAP8Q8ND71 665 aaPredicted RBP14.47□□□□□ -0.09
CPSF6-201ENST00000266679 COA1Q9GZY4 146 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 CUEDC2Q9H467 287 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 RIOX1Q9H6W3 641 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 MAGEF1Q9HAY2 307 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 EXOC1Q9NV70 894 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 ZNF446Q9NWS9 450 aa14.47□□□□□ -0.09
CPSF6-201ENST00000266679 TTF2Q9UNY4 1162 aaKnown RBP14.47□□□□□ -0.09
CPSF6-201ENST00000266679 FECHP22830 423 aa14.46□□□□□ -0.09
CPSF6-201ENST00000266679 CLCN6P51797 869 aa14.46□□□□□ -0.09
CPSF6-201ENST00000266679 GABPAQ06546 454 aa14.46□□□□□ -0.09
CPSF6-201ENST00000266679 PDE4DQ08499 809 aa14.46□□□□□ -0.09
CPSF6-201ENST00000266679 ASPRV1Q53RT3 343 aa14.46□□□□□ -0.09
CPSF6-201ENST00000266679 USP40Q9NVE5 1235 aa14.46□□□□□ -0.09
CPSF6-201ENST00000266679 MAGEC2Q9UBF1 373 aaPredicted RBP14.46□□□□□ -0.09
CPSF6-201ENST00000266679 ATP6V0A2Q9Y487 856 aa14.46□□□□□ -0.09
CPSF6-201ENST00000266679 ESYT2A0FGR8 921 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 KLRG2A4D1S0 409 aaPredicted RBP14.46□□□□□ -0.1
CPSF6-201ENST00000266679 LGALS16A8MUM7 142 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 EFCAB8A8MWE9 144 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 TXKP42681 527 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 CNKSR1Q969H4 720 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 CCDC47Q96A33 483 aaKnown RBP14.46□□□□□ -0.1
CPSF6-201ENST00000266679 TRIM9Q9C026 710 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 ZMYND15Q9H091 742 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 THAP9Q9H5L6 903 aa14.46□□□□□ -0.1
CPSF6-201ENST00000266679 IGKV6D-41A0A0C4DH26 115 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 KIF5CO60282 957 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 HSPA6P17066 643 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 KRT9P35527 623 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 CALCRLQ16602 461 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 TTI2Q6NXR4 508 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 TMC4Q7Z404 712 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 TMTC1Q8IUR5 882 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 MMTAG2Q9BU76 263 aaKnown RBP14.45□□□□□ -0.1
CPSF6-201ENST00000266679 SLC37A4O43826 429 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 TDP2O95551 362 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 NPR1P16066 1061 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 EEF1GP26641 437 aaKnown RBP14.45□□□□□ -0.1
CPSF6-201ENST00000266679 ATP2B2Q01814 1243 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 TEX35Q5T0J7 233 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 CYP26C1Q6V0L0 522 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 MB21D1Q8N884 522 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 CALML4Q96GE6 196 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 DUSP9Q99956 384 aaKnown RBP14.45□□□□□ -0.1
CPSF6-201ENST00000266679 ZC3H12CQ9C0D7 883 aaKnown RBP14.45□□□□□ -0.1
CPSF6-201ENST00000266679 EPC1Q9H2F5 836 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 TAOK3Q9H2K8 898 aa14.45□□□□□ -0.1
CPSF6-201ENST00000266679 hCG_1984214I3L0E3 225 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 MPHOSPH10O00566 681 aaKnown RBP14.44□□□□□ -0.1
CPSF6-201ENST00000266679 TOMM70O94826 608 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 FCER1AP12319 257 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 TNNI2P48788 182 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 UBE2SQ16763 222 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 ZNF569Q5MCW4 686 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 CSGALNACT2Q8N6G5 542 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 ZNF713Q8N859 430 aaPredicted RBP14.44□□□□□ -0.1
CPSF6-201ENST00000266679 P2RX5Q93086 422 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 EEF2KMTQ96G04 330 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 DHTKD1Q96HY7 919 aaPredicted RBP14.44□□□□□ -0.1
CPSF6-201ENST00000266679 C7orf25Q9BPX7 421 aa14.44□□□□□ -0.1
CPSF6-201ENST00000266679 GREB1LQ9C091 1923 aaPredicted RBP14.44□□□□□ -0.1
CPSF6-201ENST00000266679 B4DLN1 442 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 TTLL1O95922 423 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 SLURP2P0DP57 97 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 ZSCAN20P17040 1043 aaPredicted RBP14.43□□□□□ -0.1
CPSF6-201ENST00000266679 SHMT1P34896 483 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 STK4Q13043 487 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 CCDC96Q2M329 555 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 TTBK2Q6IQ55 1244 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 KRT222Q8N1A0 295 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 HPS3Q969F9 1004 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 SLF1Q9BQI6 1058 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 SERPINB13Q9UIV8 391 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 WDR90Q96KV7 1748 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 MYH7BA7E2Y1 1941 aa14.43□□□□□ -0.1
CPSF6-201ENST00000266679 TTC26A0AVF1 554 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms