RNA–Protein interactions for RNA: ENST00000261415.11

COL4A3BP-201, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 1 (best) BASIC

Gene COL4A3BP, Length 2,262 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-201ENST00000261415 PHF20Q9BVI0 1012 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 KCNG1Q9UIX4 513 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 RLFQ13129 1914 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 KIF28PB7ZC32 967 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 FIBPO43427 364 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 WWC2Q6AWC2 1192 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 MOB2Q70IA6 237 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 HEATR3Q7Z4Q2 680 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 LPAR1Q92633 364 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 MTMR8Q96EF0 704 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 LOC285556D6RIA3 1793 aa21.36■■□□□ 1.01
COL4A3BP-201ENST00000261415 COL11A1P12107 1806 aaPredicted RBP21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 CAVIN2O95810 425 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 IKQ13123 557 aaPredicted RBP21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 BTNL9Q6UXG8 535 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 CBX8Q9HC52 389 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 SH3GLB2Q9NR46 395 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 BARHL2Q9NY43 387 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 DONSONQ9NYP3 566 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 TRIM75PA6NK02 468 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 STAT2P52630 851 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 BACE1P56817 501 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 DGKZQ13574 1117 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 SAFBQ15424 915 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 SWT1Q5T5J6 900 aaKnown RBP21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 ANKRD13AQ8IZ07 590 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 GPATCH11Q8N954 259 aa21.35■■□□□ 1.01
COL4A3BP-201ENST00000261415 STXBP3O00186 592 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 USP14P54578 494 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 DNM1Q05193 864 aaKnown RBP21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 FMR1Q06787 632 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 ARHGAP29Q52LW3 1261 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 TYW1BQ6NUM6 668 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 SUGP1Q8IWZ8 645 aaKnown RBP21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 DIS3L2Q8IYB7 885 aaKnown RBP21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 WDR46O15213 610 aaKnown RBP21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 SKILP12757 684 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 SYDE2Q5VT97 1194 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 ARMC9Q7Z3E5 817 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 DRC1Q96MC2 740 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 NUP62CLQ9H1M0 184 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 EMILIN3Q9NT22 766 aa21.34■■□□□ 1.01
COL4A3BP-201ENST00000261415 PNMA6FA0A0J9YX94 578 aa21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 ZBTB5O15062 677 aa21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 PRR29P0C7W0 189 aa21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 ACTN2P35609 894 aa21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 GNL2Q13823 731 aaKnown RBP21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 BRAPQ7Z569 592 aa21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 CCAR2Q8N163 923 aaKnown RBP21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 AFG3L2Q9Y4W6 797 aa21.33■■□□□ 1.01
COL4A3BP-201ENST00000261415 USP27XA6NNY8 438 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 BTBD18B2RXH4 712 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 NPY5RQ15761 445 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 CNPY4Q8N129 248 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 CCDC148Q8NFR7 591 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 PPM1EQ8WY54 764 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 CLMNQ96JQ2 1002 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 ZNF408Q9H9D4 720 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 hCG_1984214I3L0E3 225 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 NLRP5P59047 1200 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 CDC37Q16543 378 aaPredicted RBP21.32■■□□□ 1
COL4A3BP-201ENST00000261415 ZNF713Q8N859 430 aaPredicted RBP21.32■■□□□ 1
COL4A3BP-201ENST00000261415 FOXP1Q9H334 677 aaPredicted RBP21.32■■□□□ 1
COL4A3BP-201ENST00000261415 ELP3Q9H9T3 547 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 PRR12Q9ULL5 1215 aa21.32■■□□□ 1
COL4A3BP-201ENST00000261415 PLA2G6O60733 806 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 PPP1R11O60927 126 aaPredicted RBP21.31■■□□□ 1
COL4A3BP-201ENST00000261415 VCAM1P19320 739 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 OAS2P29728 719 aaKnown RBP21.31■■□□□ 1
COL4A3BP-201ENST00000261415 KRT2P35908 639 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 GSCP56915 257 aaPredicted RBP21.31■■□□□ 1
COL4A3BP-201ENST00000261415 FAM177A1Q8N128 213 aaPredicted RBP21.31■■□□□ 1
COL4A3BP-201ENST00000261415 OXER1Q8TDS5 423 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 CHURC1Q8WUH1 139 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 CNKSR2Q8WXI2 1034 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 FEM1BQ9UK73 627 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 C19orf81C9J6K1 198 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 HMGCS2P54868 508 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 NAPAP54920 295 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 NR5A1Q13285 461 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 QRICH1Q2TAL8 776 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 CCDC144BQ3MJ40 725 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 LEKR1Q6ZMV7 388 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 CCDC12Q8WUD4 166 aaPredicted RBP21.31■■□□□ 1
COL4A3BP-201ENST00000261415 UBXN4Q92575 508 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 MRFAP1L1Q96HT8 127 aa21.31■■□□□ 1
COL4A3BP-201ENST00000261415 CALML3P27482 149 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 TPRNQ4KMQ1 711 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 ANO6Q4KMQ2 910 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 FAM160B2Q86V87 743 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 C12orf42Q96LP6 360 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 KRT85P78386 507 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 SARM1Q6SZW1 724 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 PACS2Q86VP3 889 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 NOSTRINQ8IVI9 506 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 COA7Q96BR5 231 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 FBXO28Q9NVF7 368 aa21.3■■□□□ 1
COL4A3BP-201ENST00000261415 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.3■■□□□ 11e-6■■■□□ 15.8
COL4A3BP-201ENST00000261415 SMC1AQ14683 1233 aaKnown RBP21.29■■□□□ 1
COL4A3BP-201ENST00000261415 LDLRAD1Q5T700 205 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms