RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 PLIN4Q96Q06 1357 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 hCG_1984214I3L0E3 225 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 EBAG9O00559 213 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 CDK8P49336 464 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 PPFIA1Q13136 1202 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 ZNF713Q8N859 430 aaPredicted RBP12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 DYNLL2Q96FJ2 89 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 EYA3Q99504 573 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 CRACR2AQ9BSW2 395 aa12.07□□□□□ -0.48
CHRNA1-201ENST00000261007 ATXN2Q99700 1313 aaKnown RBP12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 MYH1P12882 1939 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 PALM3A6NDB9 673 aaPredicted RBP12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 PPP1R3GB7ZBB8 358 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 LAD1O00515 517 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 NOVP48745 357 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 IRAK1P51617 712 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 RHBDL3P58872 404 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 GRIK5Q16478 980 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 NCAPH2Q6IBW4 605 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 EHBP1Q8NDI1 1231 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 TMEM47Q9BQJ4 181 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 ZC3H12CQ9C0D7 883 aaKnown RBP12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 MAD2L2Q9UI95 211 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 SAR1BQ9Y6B6 198 aa12.06□□□□□ -0.48
CHRNA1-201ENST00000261007 SNED1Q8TER0 1413 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 ANKRD31Q8N7Z5 1873 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 SRGNP10124 158 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 CD44P16070 742 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 LONP1P36776 959 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 EVX2Q03828 476 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 GRIN1Q05586 938 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 SEMA3FQ13275 785 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 CCNI2Q6ZMN8 369 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 PIK3AP1Q6ZUJ8 805 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 GRAMD1CQ8IYS0 662 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 ANKRD20A12PQ8NF67 263 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 GPR101Q96P66 508 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 SWAP70Q9UH65 585 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 EPN1Q9Y6I3 576 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 CCDC194A0A1B0GVG4 234 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 hCG_1642624A0A1W2PR95 340 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 GOLGA8KD6RF30 607 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 PARP1P09874 1014 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 GGCXP38435 758 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 DPYDQ12882 1025 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 PTGDRQ13258 359 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 ORC2Q13416 577 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 ZNF174Q15697 407 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 ZNF772Q68DY9 489 aaPredicted RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 IQCEQ6IPM2 695 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 PAGE5Q96GU1 130 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 BARHL2Q9NY43 387 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 SAP30BPQ9UHR5 308 aaKnown RBP12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 STX8Q9UNK0 236 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 FAM169AQ9Y6X4 670 aa12.05□□□□□ -0.48
CHRNA1-201ENST00000261007 LOC102724159A0A0B4J2E5 919 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 USP17L3A6NCW0 530 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 USP17L4A6NCW7 530 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 GOLGA6CA6NDK9 693 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 AGPSO00116 658 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 N4BP3O15049 544 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 NDUFA10O95299 355 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 ABL1P00519 1130 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 TFRCP02786 760 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 GOLGA6DP0CG33 693 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 GNA11P29992 359 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 PWP2Q15269 919 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 EARS2Q5JPH6 523 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 USP17L1Q7RTZ2 530 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 SPATS2Q86XZ4 545 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 SYMPKQ92797 1274 aaKnown RBP12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 MASTLQ96GX5 879 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 NUP88Q99567 741 aaPredicted RBP12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 SLF1Q9BQI6 1058 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 GOLGA6AQ9NYA3 693 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 DAGLAQ9Y4D2 1042 aa12.04□□□□□ -0.48
CHRNA1-201ENST00000261007 SHTN1A0MZ66 631 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 ANO9A1A5B4 782 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 FAM205CA6NFA0 338 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 ANKRD65E5RJM6 399 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 KRT9P35527 623 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 COPB1P53618 953 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 FKBP1AP62942 108 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 GTF2IP78347 998 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 KRT31Q15323 416 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 CCDC70Q6NSX1 233 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 KRT25Q7Z3Z0 450 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 PROM2Q8N271 834 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 RRP36Q96EU6 259 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 MMS19Q96T76 1030 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 TACO1Q9BSH4 297 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 SELENOOQ9BVL4 669 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 PLEKHA4Q9H4M7 779 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 SEC63Q9UGP8 760 aaKnown RBP12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 RWDD2AQ9UIY3 292 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 ESYT2A0FGR8 921 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 GOLGA6BA6NDN3 693 aa12.03□□□□□ -0.48
CHRNA1-201ENST00000261007 KLRF2D3W0D1 207 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms