RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 TMTC3Q6ZXV5 915 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 CABS1Q96KC9 395 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 NHEJ1Q9H9Q4 299 aaPredicted RBP16.76■□□□□ 0.27
RIPK1-201ENST00000259808 SUGCTQ9HAC7 445 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 RASAL2Q9UJF2 1139 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 MINPP1Q9UNW1 487 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 TTC26A0AVF1 554 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 KRIT1O00522 736 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 NR2F2P24468 414 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 CYP19A1P11511 503 aaPredicted RBP16.76■□□□□ 0.27
RIPK1-201ENST00000259808 CTNNA1P35221 906 aaKnown RBP16.76■□□□□ 0.27
RIPK1-201ENST00000259808 CCDC105Q8IYK2 499 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 ARFGAP2Q8N6H7 521 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 CCDC26Q8TAB7 109 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 BCS1LQ9Y276 419 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 HYOU1Q9Y4L1 999 aa16.76■□□□□ 0.27
RIPK1-201ENST00000259808 PAK2Q13177 524 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 IGDCC4Q8TDY8 1250 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 EPB41L4AQ9HCS5 686 aaPredicted RBP16.75■□□□□ 0.27
RIPK1-201ENST00000259808 ADAM21Q9UKJ8 722 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 HPS5Q9UPZ3 1129 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 USP42Q9H9J4 1324 aaKnown RBP16.75■□□□□ 0.27
RIPK1-201ENST00000259808 MAP2P11137 1827 aaKnown RBP16.75■□□□□ 0.27
RIPK1-201ENST00000259808 HOXA13P31271 388 aaPredicted RBP16.75■□□□□ 0.27
RIPK1-201ENST00000259808 TUBB4BP68371 445 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 ANKRD42Q8N9B4 389 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 FLOT1O75955 427 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 MLXIPQ9HAP2 919 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 DCP1AQ9NPI6 582 aaPredicted RBP16.75■□□□□ 0.27
RIPK1-201ENST00000259808 ADGRG1Q9Y653 693 aa16.75■□□□□ 0.27
RIPK1-201ENST00000259808 FCER1AP12319 257 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 IFNAR2P48551 515 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 DISC1Q9NRI5 854 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 CCDC151A5D8V7 595 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 NCK2O43639 380 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 FXR1P51114 621 aaKnown RBP eCLIP16.74■□□□□ 0.27
RIPK1-201ENST00000259808 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 CC2D1AQ6P1N0 951 aaPredicted RBP16.74■□□□□ 0.27
RIPK1-201ENST00000259808 PLVAPQ9BX97 442 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 PACSIN2Q9UNF0 486 aaPredicted RBP16.74■□□□□ 0.27
RIPK1-201ENST00000259808 GJA3Q9Y6H8 435 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 GAS7O60861 476 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 STAT1P42224 750 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 TXNRD1Q16881 649 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L6PQ6QN14 398 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 PROCA1Q8NCQ7 364 aaPredicted RBP16.74■□□□□ 0.27
RIPK1-201ENST00000259808 ENGASEQ8NFI3 743 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 FBF1Q8TES7 1133 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 STAG1Q8WVM7 1258 aa16.74■□□□□ 0.27
RIPK1-201ENST00000259808 MTRF1LQ9UGC7 380 aaKnown RBP16.74■□□□□ 0.27
RIPK1-201ENST00000259808 UTP11Q9Y3A2 253 aaKnown RBP16.74■□□□□ 0.27
RIPK1-201ENST00000259808 SRBD1Q8N5C6 995 aaKnown RBP16.74■□□□□ 0.27
RIPK1-201ENST00000259808 C1orf167Q5SNV9 1468 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 HEXIM1O94992 359 aaKnown RBP16.73■□□□□ 0.27
RIPK1-201ENST00000259808 PPFIA1Q13136 1202 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 TEKT1Q969V4 418 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 FUCA2Q9BTY2 467 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 AP1M1Q9BXS5 423 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 IKBKGQ9Y6K9 419 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.73■□□□□ 0.27
RIPK1-201ENST00000259808 USP17L5A8MUK1 530 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 ZBTB16Q05516 673 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 CERKLQ49MI3 558 aaPredicted RBP16.73■□□□□ 0.27
RIPK1-201ENST00000259808 SEL1L2Q5TEA6 688 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 PPM1KQ8N3J5 372 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 TMEM47Q9BQJ4 181 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 CAPN7Q9Y6W3 813 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 ICA1Q05084 483 aa16.73■□□□□ 0.27
RIPK1-201ENST00000259808 RIN2Q8WYP3 895 aaPredicted RBP16.73■□□□□ 0.27
RIPK1-201ENST00000259808 APBA3O96018 575 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 ACTN2P35609 894 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 PPP1R2P41236 205 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 TUBB2AQ13885 445 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 MB21D1Q8N884 522 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 FNBP1Q96RU3 617 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 TUBB2BQ9BVA1 445 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 ABHD10Q9NUJ1 306 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 RWDD2AQ9UIY3 292 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 FBXO2Q9UK22 296 aaPredicted RBP16.72■□□□□ 0.27
RIPK1-201ENST00000259808 HDAC9Q9UKV0 1011 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 CALUO43852 315 aaPredicted RBP16.72■□□□□ 0.27
RIPK1-201ENST00000259808 PRPF6O94906 941 aaKnown RBP16.72■□□□□ 0.27
RIPK1-201ENST00000259808 TFRCP02786 760 aaKnown RBP16.72■□□□□ 0.27
RIPK1-201ENST00000259808 DLATP10515 647 aaKnown RBP16.72■□□□□ 0.27
RIPK1-201ENST00000259808 CDK8P49336 464 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 TMC4Q7Z404 712 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 LRRN4CLQ8ND94 238 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 LZTS2Q9BRK4 669 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 CAPS2Q9BXY5 557 aa16.72■□□□□ 0.27
RIPK1-201ENST00000259808 NDST4Q9H3R1 872 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms