RNA–Protein interactions for RNA: ENST00000257262.12

TMEM258-201, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 468 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-201ENST00000257262 RXRAP19793 462 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 BAATQ14032 418 aaPredicted RBP9.91□□□□□ -0.82
TMEM258-201ENST00000257262 SLC35G1Q2M3R5 365 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 BLOC1S2Q6QNY1 142 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 MAMDC4Q6UXC1 1216 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 NSMFQ6X4W1 530 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 SGMS1Q86VZ5 419 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 FBXO11Q86XK2 927 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 RAB11FIP4Q86YS3 637 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 CCDC144CPQ8IYA2 1237 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 FAM133AQ8N9E0 248 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 CTCFLQ8NI51 663 aaPredicted RBP9.91□□□□□ -0.82
TMEM258-201ENST00000257262 CLEC4DQ8WXI8 215 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 FGD4Q96M96 766 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 PURBQ96QR8 312 aaKnown RBP9.91□□□□□ -0.82
TMEM258-201ENST00000257262 PIGSQ96S52 555 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 CRISPLD2Q9H0B8 497 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 RIOX1Q9H6W3 641 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 PNMA2Q9UL42 364 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 BRPF3Q9ULD4 1205 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 SLC12A7Q9Y666 1083 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 LCTP09848 1927 aa9.91□□□□□ -0.82
TMEM258-201ENST00000257262 PFASO15067 1338 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 ABCB11O95342 1321 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 PTPDC1A2A3K4 754 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 ZBTB5O15062 677 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 PPP1R11O60927 126 aaPredicted RBP9.9□□□□□ -0.82
TMEM258-201ENST00000257262 DDAH1O94760 285 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 SNAI1O95863 264 aaPredicted RBP9.9□□□□□ -0.82
TMEM258-201ENST00000257262 CALM1P0DP23 149 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 CALM2P0DP24 149 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 CALM3P0DP25 149 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 PSMA5P28066 241 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 SYNE3Q6ZMZ3 975 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 RNF207Q6ZRF8 634 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 Q6ZUG5 572 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 HOMER1Q86YM7 354 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 CMTR1Q8N1G2 835 aaKnown RBP9.9□□□□□ -0.82
TMEM258-201ENST00000257262 FANCBQ8NB91 859 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 TBC1D5Q92609 795 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 MTMR8Q96EF0 704 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 AMNQ9BXJ7 453 aa9.9□□□□□ -0.82
TMEM258-201ENST00000257262 ASTN1O14525 1302 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 SYNGAP1Q96PV0 1343 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 PLEKHA8P1O95397 391 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 ZNF865P0CJ78 1059 aaPredicted RBP9.89□□□□□ -0.83
TMEM258-201ENST00000257262 CAPN2P17655 700 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 CASTP20810 708 aaKnown RBP9.89□□□□□ -0.83
TMEM258-201ENST00000257262 RPS6KB1P23443 525 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 CALML3P27482 149 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 KIF5BP33176 963 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 FGD1P98174 961 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 ANO1Q5XXA6 986 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 APOA5Q6Q788 366 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 SLC30A10Q6XR72 485 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 SRBD1Q8N5C6 995 aaKnown RBP9.89□□□□□ -0.83
TMEM258-201ENST00000257262 MSL3Q8N5Y2 521 aaKnown RBP9.89□□□□□ -0.83
TMEM258-201ENST00000257262 PIBF1Q8WXW3 757 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.89□□□□□ -0.83
TMEM258-201ENST00000257262 DDX20Q9UHI6 824 aaKnown RBP9.89□□□□□ -0.83
TMEM258-201ENST00000257262 OGDHLQ9ULD0 1010 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 PCDHA1Q9Y5I3 950 aa9.89□□□□□ -0.83
TMEM258-201ENST00000257262 DDX49Q9Y6V7 483 aaKnown RBP9.89□□□□□ -0.83
TMEM258-201ENST00000257262 PNMA6FA0A0J9YX94 578 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 KLF18A0A0U1RQI7 1052 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 ASB14A6NK59 587 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 SEPT4O43236 478 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 ZBTB43O43298 467 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 MSCO60682 206 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 SMARCA1P28370 1054 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 GNAQP50148 359 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 RPS6P62753 249 aaKnown RBP9.88□□□□□ -0.83
TMEM258-201ENST00000257262 APOBRQ0VD83 1088 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 ACVR2BQ13705 512 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 RUFY3Q7L099 469 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 ARMCX2Q7L311 632 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 UBE2Q1Q7Z7E8 422 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 MICU3Q86XE3 530 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 CCDC82Q8N4S0 544 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 ANKLE1Q8NAG6 615 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 RGS22Q8NE09 1264 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 BRF1Q92994 677 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 LZTS2Q9BRK4 669 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 SPZ1Q9BXG8 430 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 ABHD16BQ9H3Z7 469 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 NRBP1Q9UHY1 535 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 CNPY2Q9Y2B0 182 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 MRPL11Q9Y3B7 192 aaKnown RBP9.88□□□□□ -0.83
TMEM258-201ENST00000257262 MCM3APO60318 1980 aa9.88□□□□□ -0.83
TMEM258-201ENST00000257262 OPLAHO14841 1288 aa9.87□□□□□ -0.83
TMEM258-201ENST00000257262 FARP2O94887 1054 aaPredicted RBP9.87□□□□□ -0.83
TMEM258-201ENST00000257262 CFBP00751 764 aa9.87□□□□□ -0.83
TMEM258-201ENST00000257262 ALDH5A1P51649 535 aaPredicted RBP9.87□□□□□ -0.83
TMEM258-201ENST00000257262 MCF2L2Q86YR7 1114 aa9.87□□□□□ -0.83
TMEM258-201ENST00000257262 FBXL16Q8N461 479 aa9.87□□□□□ -0.83
TMEM258-201ENST00000257262 DIS3LQ8TF46 1054 aaKnown RBP9.87□□□□□ -0.83
TMEM258-201ENST00000257262 RRP36Q96EU6 259 aaKnown RBP9.87□□□□□ -0.83
TMEM258-201ENST00000257262 PAWRQ96IZ0 340 aaKnown RBP9.87□□□□□ -0.83
TMEM258-201ENST00000257262 TAAR1Q96RJ0 339 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms