RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 BCORQ6W2J9 1755 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 FGRP09769 529 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 CTTNQ14247 550 aaKnown RBP13.14□□□□□ -0.31
LIN28A-201ENST00000254231 PTPAQ15257 358 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 KIAA1024Q9UPX6 916 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 NPHP3-ACAD11A0A0J9YXS1 232 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 TMEM150BA6NC51 233 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 CUL4BQ13620 913 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 CABP7Q86V35 215 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 MAP3K14Q99558 947 aa13.14□□□□□ -0.31
LIN28A-201ENST00000254231 SMCHD1A6NHR9 2005 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 MCM6Q14566 821 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 PPP2R5BQ15173 497 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 MUM1L1Q5H9M0 696 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
LIN28A-201ENST00000254231 ZNF280CQ8ND82 737 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 IL17RAQ96F46 866 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 SLC39A2Q9NP94 309 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 TSKSQ9UJT2 592 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 FBXO2Q9UK22 296 aaPredicted RBP13.13□□□□□ -0.31
LIN28A-201ENST00000254231 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 CUTAO60888 179 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 CMA1P23946 247 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 MSNP26038 577 aaKnown RBP13.13□□□□□ -0.31
LIN28A-201ENST00000254231 NPY5RQ15761 445 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 NYAP2Q9P242 653 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 KIAA1468Q9P260 1216 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 GDAQ9Y2T3 454 aa13.13□□□□□ -0.31
LIN28A-201ENST00000254231 E9PMD0 336 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 OR52Z1P0C646 297 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 BAATQ14032 418 aaPredicted RBP13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POSTNQ15063 836 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 TMEM266Q2M3C6 531 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 TREML2Q5T2D2 321 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 UTP14CQ5TAP6 766 aaKnown RBP13.12□□□□□ -0.31
LIN28A-201ENST00000254231 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 ARID5BQ14865 1188 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 IL17AQ16552 155 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 TATDN1Q6P1N9 297 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 KRBA2Q6ZNG9 492 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 KRT25Q7Z3Z0 450 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 TICAM2Q86XR7 235 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 RDH13Q8NBN7 331 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 R3HDMLQ9H3Y0 253 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 ADARB2Q9NS39 739 aaKnown RBP13.12□□□□□ -0.31
LIN28A-201ENST00000254231 MYH7P12883 1935 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POTEB3A0JP26 581 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POTEFA5A3E0 1075 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POTECB2RU33 542 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 ZBED4O75132 1171 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 PLCG1P19174 1290 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 ARHGAP4P98171 946 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 KRT79Q5XKE5 535 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POTEBQ6S5H4 581 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POTEGQ6S5H5 508 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 POTEEQ6S8J3 1075 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 TRERF1Q96PN7 1200 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 USP20Q9Y2K6 914 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 ELP1O95163 1332 aa13.12□□□□□ -0.31
LIN28A-201ENST00000254231 DUOX1Q9NRD9 1551 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 PTPRAP18433 802 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 PTPREP23469 700 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 MARK3P27448 753 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 PLA2G4DQ86XP0 818 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 CALML4Q96GE6 196 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 TEPSINQ96N21 525 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 SLF1Q9BQI6 1058 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 SPZ1Q9BXG8 430 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 RRAGDQ9NQL2 400 aaPredicted RBP13.11□□□□□ -0.31
LIN28A-201ENST00000254231 ANO10Q9NW15 660 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 TMX2Q9Y320 296 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 ARHGEF16Q5VV41 709 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 METTL16Q86W50 562 aaKnown RBP13.11□□□□□ -0.31
LIN28A-201ENST00000254231 DPF2Q92785 391 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 LZTS2Q9BRK4 669 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 BCAS3Q9H6U6 928 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 SH2D4AQ9H788 454 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 EMILIN3Q9NT22 766 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 Q3C1V9 767 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 IQUBQ8NA54 791 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 PRPF38AQ8NAV1 312 aaKnown RBP13.11□□□□□ -0.31
LIN28A-201ENST00000254231 BANK1Q8NDB2 785 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 CCDC34Q96HJ3 373 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 P2RX7Q99572 595 aaKnown RBP13.11□□□□□ -0.31
LIN28A-201ENST00000254231 RNF146Q9NTX7 359 aa13.11□□□□□ -0.31
LIN28A-201ENST00000254231 TRMT1Q9NXH9 659 aaKnown RBP13.11□□□□□ -0.31
LIN28A-201ENST00000254231 HOOK1Q9UJC3 728 aaKnown RBP13.11□□□□□ -0.31
LIN28A-201ENST00000254231 COL11A2P13942 1736 aaPredicted RBP13.1□□□□□ -0.31
LIN28A-201ENST00000254231 BACH1O14867 736 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 HARSP12081 509 aaKnown RBP13.1□□□□□ -0.31
LIN28A-201ENST00000254231 RPS6P62753 249 aaKnown RBP13.1□□□□□ -0.31
LIN28A-201ENST00000254231 STX1AQ16623 288 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 CDCA5Q96FF9 252 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 RMDN3Q96TC7 470 aa13.1□□□□□ -0.31
LIN28A-201ENST00000254231 FANCLQ9NW38 375 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms