RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 ZYXQ15942 572 aaKnown RBP12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 SH3RF1Q7Z6J0 888 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 CLMNQ96JQ2 1002 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 C16orf45Q96MC5 204 aaPredicted RBP12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 PCDHA6Q9UN73 950 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 PCDHA8Q9Y5H6 950 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 SNCAIPQ9Y6H5 919 aa12.89□□□□□ -0.35
CLUHP3-201ENST00000254109 USP17L5A8MUK1 530 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 M0R2N6 131 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 CELF2O95319 508 aaKnown RBP12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 TNNT1P13805 278 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 GNA11P29992 359 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 IREB2P48200 963 aaKnown RBP12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 NAPAP54920 295 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 KIAA1755Q5JYT7 1200 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 USP17L2Q6R6M4 530 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 DTHD1Q6ZMT9 781 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 CNKSR2Q8WXI2 1034 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 MKL1Q969V6 931 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 C6orf50Q9HD87 102 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 PICK1Q9NRD5 415 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 NFE2L3Q9Y4A8 694 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 PHIPQ8WWQ0 1821 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 BAZ2BQ9UIF8 2168 aaKnown RBP12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 LAD1O00515 517 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 DPYDQ12882 1025 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 DGKZQ13574 1117 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 NOL9Q5SY16 702 aaKnown RBP12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 CST9Q5W186 159 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 TYW1BQ6NUM6 668 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 ARMC9Q7Z3E5 817 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 ARHGEF10LQ9HCE6 1279 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 PAXBP1Q9Y5B6 917 aa12.88□□□□□ -0.35
CLUHP3-201ENST00000254109 FRMPD2Q68DX3 1309 aaPredicted RBP12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 ADAMTS3O15072 1205 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 PDHBP11177 359 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 GTF2F1P35269 517 aaKnown RBP eCLIP12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 IL17AQ16552 155 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 SLC35G1Q2M3R5 365 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 ARMCX5Q6P1M9 558 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 KRT25Q7Z3Z0 450 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 VSTM4Q8IW00 320 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 SPICE1Q8N0Z3 855 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 C4orf32Q8N8J7 132 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 CCDC112Q8NEF3 446 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 RASGRP4Q8TDF6 673 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 ZMYND12Q9H0C1 365 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 ELP3Q9H9T3 547 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 KCND1Q9NSA2 647 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 RMND1Q9NWS8 449 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 TMX2Q9Y320 296 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 CSADQ9Y600 493 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 ZHX2Q9Y6X8 837 aa12.87□□□□□ -0.35
CLUHP3-201ENST00000254109 SMCO2A6NFE2 343 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 F5H6K3 240 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 hCG_1984214I3L0E3 225 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 KLRC3Q07444 240 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 SPP2Q13103 211 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 PTPN14Q15678 1187 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 INF2Q27J81 1249 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 ASPRV1Q53RT3 343 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 PPP4R3BQ5MIZ7 849 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 SLFN13Q68D06 897 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 HOMER1Q86YM7 354 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 ANKRD13AQ8IZ07 590 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 CCAR2Q8N163 923 aaKnown RBP12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 ZNF713Q8N859 430 aaPredicted RBP12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 ZNF784Q8NCA9 323 aaPredicted RBP12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 NUP88Q99567 741 aaPredicted RBP12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 FEZ1Q99689 392 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 CPVLQ9H3G5 476 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 GBA2Q9HCG7 927 aaPredicted RBP12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 GINM1Q9NU53 330 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 TRPM7Q96QT4 1865 aa12.86□□□□□ -0.35
CLUHP3-201ENST00000254109 GTPBP6O43824 516 aaPredicted RBP12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 NDUFB10O96000 172 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 ZNF18P17022 549 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 STAT6P42226 847 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 KCNJ6P48051 423 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 NONOQ15233 471 aaKnown RBP eCLIP12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 E2F4Q16254 413 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 SPATA1Q5VX52 437 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 CEP135Q66GS9 1140 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 PDXDC2PQ6P474 469 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 TRMT44Q8IYL2 757 aaKnown RBP12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 VAT1LQ9HCJ6 419 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 GPCPD1Q9NPB8 672 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 CCP110O43303 1012 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 SNHG28P0DPA3 235 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 PRPHP41219 470 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 MTMR2Q13614 643 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 CCDC96Q2M329 555 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 LDLRAD1Q5T700 205 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 TTBK2Q6IQ55 1244 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 KCTD1Q719H9 257 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 GMCL1P1Q8NEA9 526 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 UBA5Q9GZZ9 404 aa12.85□□□□□ -0.35
CLUHP3-201ENST00000254109 SYNRGQ9UMZ2 1314 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms