RNA–Protein interactions for RNA: ENST00000253363.10

RBM39-201, Transcript of RNA binding motif protein 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RBM39, Length 2,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-201ENST00000253363 COL4A3BPQ9Y5P4 624 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 ADAMTSL1Q8N6G6 1762 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 C2CD2LO14523 706 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 GJB6O95452 261 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 A1BGP04217 495 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 HSPA6P17066 643 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 EPHA1P21709 976 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 BDNFP23560 247 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 PCDH1Q08174 1060 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 MPP2Q14168 576 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 SF3B3Q15393 1217 aaKnown RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 LRP10Q7Z4F1 713 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 CCDC146Q8IYE0 955 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 RPUSD2Q8IZ73 545 aaKnown RBP4.46□□□□□ -1.7
RBM39-201ENST00000253363 MKL1Q969V6 931 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 LRRC3Q9BY71 257 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 RNF181Q9P0P0 153 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 CORINQ9Y5Q5 1042 aa4.46□□□□□ -1.7
RBM39-201ENST00000253363 EPB41L2O43491 1005 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 GHRHP01286 108 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PCCAP05165 728 aaPredicted RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 VEGFAP15692 232 aaPredicted RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 RHBDL3P58872 404 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 GRAPQ13588 217 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 ZYXQ15942 572 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 C4orf46Q504U0 113 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PKDCCQ504Y2 493 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PERM1Q5SV97 790 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 DUSP27Q5VZP5 1158 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 DDX46Q7L014 1031 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 LDHDQ86WU2 507 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 SP8Q8IXZ3 490 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 TRIM22Q8IYM9 498 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 GRAPLQ8TC17 118 aaPredicted RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 CRBNQ96SW2 442 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PLA2G12BQ9BX93 195 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PCDH12Q9NPG4 1184 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PRR12Q9ULL5 1215 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 ADAMTS8Q9UP79 889 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 ATP6V0A2Q9Y487 856 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 USP16Q9Y5T5 823 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 SBF1O95248 1867 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 LTBP1Q14766 1721 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PTPRCP08575 1304 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 MYO3BQ8WXR4 1341 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 A0A0G2JLW4 131 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 CCDC189A1A4V9 331 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 CDC14CA4D256 554 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PDPK1O15530 556 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 DNAJA2O60884 412 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 EIF3JO75822 258 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 ITGA6P23229 1130 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 IARSP41252 1262 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 GYS2P54840 703 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 LAMC2Q13753 1193 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 LBRQ14739 615 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 TNIP1Q15025 636 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 MTERF2Q49AM1 385 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 CCDC152Q4G0S7 254 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 GDF6Q6KF10 455 aaPredicted RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 LLGL2Q6P1M3 1020 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 PDZD3Q86UT5 571 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 NLRP10Q86W26 655 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 GPC2Q8N158 579 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 ZBTB38Q8NAP3 1195 aaPredicted RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 JDP2Q8WYK2 163 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 CDC5LQ99459 802 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 SMG9Q9H0W8 520 aaKnown RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 ATXN7L1Q9ULK2 861 aaPredicted RBP4.45□□□□□ -1.7
RBM39-201ENST00000253363 SOX13Q9UN79 622 aa4.45□□□□□ -1.7
RBM39-201ENST00000253363 ABCC12Q96J65 1359 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 H7C1W4 665 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 ALDH1L1O75891 902 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 DDAH1O94760 285 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 BPNT1O95861 308 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 C21orf62-AS1Q17RA5 79 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 PLEKHG4Q58EX7 1191 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 TNNI3KQ59H18 835 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 RNF187Q5TA31 235 aaPredicted RBP4.44□□□□□ -1.7
RBM39-201ENST00000253363 WDR78Q5VTH9 848 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 NIM1KQ8IY84 436 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 STAG1Q8WVM7 1258 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 SLC7A3Q8WY07 619 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 ZNF622Q969S3 477 aaKnown RBP eCLIP4.44□□□□□ -1.77e-10■■□□□ 12
RBM39-201ENST00000253363 METTL22Q9BUU2 404 aaPredicted RBP4.44□□□□□ -1.7
RBM39-201ENST00000253363 AAASQ9NRG9 546 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 MBIPQ9NS73 344 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 CWC25Q9NXE8 425 aaPredicted RBP4.44□□□□□ -1.7
RBM39-201ENST00000253363 PCDHB10Q9UN67 800 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 NOP58Q9Y2X3 529 aaKnown RBP4.44□□□□□ -1.7
RBM39-201ENST00000253363 KCNQ3O43525 872 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 ZNF500O60304 480 aaPredicted RBP4.44□□□□□ -1.7
RBM39-201ENST00000253363 ESRRAP11474 423 aaPredicted RBP4.44□□□□□ -1.7
RBM39-201ENST00000253363 NME2P22392 152 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 ZNF165P49910 485 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 PPP2R3AQ06190 1150 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 ZNF252P-AS1Q0IIN9 211 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 INPP5AQ14642 412 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 ALDH1L2Q3SY69 923 aa4.44□□□□□ -1.7
RBM39-201ENST00000253363 CCDC184Q52MB2 194 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms