RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 ARHGEF6Q15052 776 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 SCARF1Q14162 830 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 FEM1BQ9UK73 627 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 MAP2K1Q02750 393 aaPredicted RBP16.57■□□□□ 0.24
UBE4B-201ENST00000253251 FBXO33Q7Z6M2 555 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 RGS22Q8NE09 1264 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 FAM184BQ9ULE4 1060 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 K7ENM7 598 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 SLC16A2P36021 539 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 ZNF658Q5TYW1 1059 aaPredicted RBP16.57■□□□□ 0.24
UBE4B-201ENST00000253251 C12orf60Q5U649 245 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 FBXO40Q9UH90 709 aa16.57■□□□□ 0.24
UBE4B-201ENST00000253251 GH2P01242 217 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 STAT1P42224 750 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 LIG4P49917 911 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 CCDC50Q8IVM0 306 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 ANO3Q9BYT9 981 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 COL5A2P05997 1499 aaPredicted RBP16.56■□□□□ 0.24
UBE4B-201ENST00000253251 TMEM110-MUSTN1A8MSY1 372 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 SPOPO43791 374 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 CYP2D6P10635 497 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 EXOSC10Q01780 885 aaKnown RBP16.56■□□□□ 0.24
UBE4B-201ENST00000253251 ALCAMQ13740 583 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 TFDP1Q14186 410 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 INTS5Q6P9B9 1019 aaKnown RBP16.56■□□□□ 0.24
UBE4B-201ENST00000253251 RETREG2Q8NC44 543 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 COA7Q96BR5 231 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 PNMA3Q9UL41 463 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 ADGRB2O60241 1585 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 SPDYE4A6NLX3 237 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 PLEKHA8P1O95397 391 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 BCCIPQ9P287 314 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBE4B-201ENST00000253251 TRPC6Q9Y210 931 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 HHIPL2Q6UWX4 724 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 RASGRP4Q8TDF6 673 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
UBE4B-201ENST00000253251 PTPREP23469 700 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 KRT222Q8N1A0 295 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.55■□□□□ 0.24
UBE4B-201ENST00000253251 RPGRIP1Q96KN7 1286 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 FAM81BQ96LP2 452 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 FANCLQ9NW38 375 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 KDM6AO15550 1401 aaPredicted RBP16.55■□□□□ 0.24
UBE4B-201ENST00000253251 ADAM9Q13443 819 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 MIS18BP1Q6P0N0 1132 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 CLEC17AQ6ZS10 378 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 GSTA5Q7RTV2 222 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 ENOX1Q8TC92 643 aaKnown RBP16.55■□□□□ 0.24
UBE4B-201ENST00000253251 MAP3K9P80192 1104 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 ADPGKQ9BRR6 497 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 TDRD3Q9H7E2 651 aaKnown RBP16.55■□□□□ 0.24
UBE4B-201ENST00000253251 TNS2Q63HR2 1409 aa16.55■□□□□ 0.24
UBE4B-201ENST00000253251 POLGP54098 1239 aaPredicted RBP16.54■□□□□ 0.24
UBE4B-201ENST00000253251 CALCOCO2Q13137 446 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 TSNARE1Q96NA8 513 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 USP17L5A8MUK1 530 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 NDC80O14777 642 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 ENTPD3O75355 529 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 RRAGAQ7L523 313 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 P2RX5Q93086 422 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 ABCB11O95342 1321 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 TERF1P54274 439 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 PLCB3Q01970 1234 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 LSM14BQ9BX40 385 aaKnown RBP16.54■□□□□ 0.24
UBE4B-201ENST00000253251 UBR1Q8IWV7 1749 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 TNNI1P19237 187 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 ODR4Q5SWX8 454 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 FNBP4Q8N3X1 1017 aaPredicted RBP16.54■□□□□ 0.24
UBE4B-201ENST00000253251 MAIP1Q8WWC4 291 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 TMEM206Q9H813 350 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 SLC39A2Q9NP94 309 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
UBE4B-201ENST00000253251 COPB1P53618 953 aaKnown RBP16.53■□□□□ 0.24
UBE4B-201ENST00000253251 EN1Q05925 392 aaPredicted RBP16.53■□□□□ 0.24
UBE4B-201ENST00000253251 DPH6Q7L8W6 267 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 PCDHB6Q9Y5E3 794 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 FKBP3Q00688 224 aaKnown RBP16.53■□□□□ 0.24
UBE4B-201ENST00000253251 ARMCX5Q6P1M9 558 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 FAM207AQ9NSI2 230 aaPredicted RBP16.53■□□□□ 0.24
UBE4B-201ENST00000253251 HOXC10Q9NYD6 342 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 BZW2Q9Y6E2 419 aaKnown RBP16.53■□□□□ 0.24
UBE4B-201ENST00000253251 NWD1Q149M9 1564 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 RESP18Q5W5W9 173 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 CEP95Q96GE4 821 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 CAPZA3Q96KX2 299 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 MIS12Q9H081 205 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 RWDD2AQ9UIY3 292 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 ATP2A2P16615 1042 aaKnown RBP16.53■□□□□ 0.24
UBE4B-201ENST00000253251 CYP2J2P51589 502 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 SLC7A3Q8WY07 619 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 SLF1Q9BQI6 1058 aa16.53■□□□□ 0.24
UBE4B-201ENST00000253251 PPP4R3CPQ6ZMV5 832 aa16.52■□□□□ 0.24
UBE4B-201ENST00000253251 ARFGAP2Q8N6H7 521 aa16.52■□□□□ 0.24
UBE4B-201ENST00000253251 CTTNBP2NLQ9P2B4 639 aa16.52■□□□□ 0.24
UBE4B-201ENST00000253251 PRPF6O94906 941 aaKnown RBP16.52■□□□□ 0.24
UBE4B-201ENST00000253251 CYP4A11Q02928 519 aa16.52■□□□□ 0.24
UBE4B-201ENST00000253251 ZNF827Q17R98 1081 aa16.52■□□□□ 0.24
UBE4B-201ENST00000253251 SREK1Q8WXA9 508 aaKnown RBP16.52■□□□□ 0.24
UBE4B-201ENST00000253251 FAM20AQ96MK3 541 aa16.52■□□□□ 0.24
UBE4B-201ENST00000253251 MAK16Q9BXY0 300 aaKnown RBP16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms