RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 DMTNQ08495 405 aa21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 ZNF543Q08ER8 600 aa21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 TTBK2Q6IQ55 1244 aa21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 BLOC1S4Q9NUP1 217 aa21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 FHOD1Q9Y613 1164 aa21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 GREB1LQ9C091 1923 aaPredicted RBP21.89■■□□□ 1.09
CDC42EP1-201ENST00000249014 B4DLN1 442 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 ARHGAP25P42331 645 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 ADGRF4Q8IZF3 695 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 KIAA0895Q8NCT3 520 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 CALML4Q96GE6 196 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 SLF1Q9BQI6 1058 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 MAGEC2Q9UBF1 373 aaPredicted RBP21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 TEX35Q5T0J7 233 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 CDC42EP5Q6NZY7 148 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 NOC3LQ8WTT2 800 aaKnown RBP21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 PNMA5Q96PV4 448 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 TUBGCP2Q9BSJ2 902 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 LRWD1Q9UFC0 647 aa21.88■■□□□ 1.09
CDC42EP1-201ENST00000249014 ZRANB2O95218 330 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 FXR2P51116 673 aaKnown RBP eCLIP21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 AMPD3Q01432 767 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 CCDC47Q96A33 483 aaKnown RBP21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 SWAP70Q9UH65 585 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 REXO2Q9Y3B8 237 aaKnown RBP21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 MYH7BA7E2Y1 1941 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 POTEMA6NI47 508 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 NKRFO15226 690 aaKnown RBP eCLIP21.87■■□□□ 1.091e-6■■■□□ 16.8
CDC42EP1-201ENST00000249014 UBE2SQ16763 222 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 APOBEC3HQ6NTF7 200 aaKnown RBP21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 SLC35F6Q8N357 371 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 OR8K1Q8NGG5 319 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 DNAJC7Q99615 494 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 QTRT2Q9H974 415 aaKnown RBP21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 CAPN11Q9UMQ6 739 aa21.87■■□□□ 1.09
CDC42EP1-201ENST00000249014 NRXN2Q9P2S2 1712 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 PNMA6FA0A0J9YX94 578 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 SLC16A2P36021 539 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 DNM2P50570 870 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 NFIAQ12857 509 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 MCM6Q14566 821 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 WDR59Q6PJI9 974 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 CNOT6LQ96LI5 555 aaKnown RBP21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 NUDT12Q9BQG2 462 aa21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 ARGLU1Q9NWB6 273 aaPredicted RBP21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 LUC7L2Q9Y383 392 aaKnown RBP21.86■■□□□ 1.09
CDC42EP1-201ENST00000249014 COL11A2P13942 1736 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 BICDL2A1A5D9 508 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 MYMKA6NI61 221 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 RASSF10A6NK89 507 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 BMS1Q14692 1282 aaKnown RBP21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 GPR161Q8N6U8 529 aaKnown RBP21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 SLC39A2Q9NP94 309 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 RIC8AQ9NPQ8 531 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 MYO3BQ8WXR4 1341 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 C10orf71Q711Q0 1435 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 NDUFA10O95299 355 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 HSPA1LP34931 641 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 TNNI2P48788 182 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 CLK2P49760 499 aaKnown RBP21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 KLK7P49862 253 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 SV2BQ7L1I2 683 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 ZFPM1Q8IX07 1006 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 TTYH3Q9C0H2 523 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 SEMA6BQ9H3T3 888 aa21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 EPN1Q9Y6I3 576 aaPredicted RBP21.85■■□□□ 1.09
CDC42EP1-201ENST00000249014 MPHOSPH10O00566 681 aaKnown RBP21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 PNMA6AP0CW24 399 aaPredicted RBP21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 NPR1P16066 1061 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 COBLL1Q53SF7 1204 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 MIIPQ5JXC2 388 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 CNNM4Q6P4Q7 775 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 TMCO3Q6UWJ1 677 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 KCTD1Q719H9 257 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 KRT27Q7Z3Y8 459 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 ZSWIM4Q9H7M6 989 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 AGPAT5Q9NUQ2 364 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 STK17AQ9UEE5 414 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 CDC23Q9UJX2 597 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 USP17L10C9JJH3 530 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 SEC31AO94979 1220 aaKnown RBP21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 ATP2B2Q01814 1243 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 TMEM266Q2M3C6 531 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 UTP14CQ5TAP6 766 aaKnown RBP21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 HHIPL2Q6UWX4 724 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 LARP4BQ92615 738 aaKnown RBP21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 RABGGTAQ92696 567 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 GOLGA1Q92805 767 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 GTPBP4Q9BZE4 634 aaKnown RBP21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 KCNQ5Q9NR82 932 aa21.84■■□□□ 1.09
CDC42EP1-201ENST00000249014 SIPA1L1O43166 1804 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 ARFGEF1Q9Y6D6 1849 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 CTAGE9A4FU28 777 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 TFRCP02786 760 aaKnown RBP21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 PPP1R18Q6NYC8 613 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 DYMQ7RTS9 669 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 KCNK18Q7Z418 384 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 TEKT1Q969V4 418 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 ST7Q9NRC1 585 aa21.83■■□□□ 1.09
CDC42EP1-201ENST00000249014 TRIM10Q9UDY6 481 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms