RNA–Protein interactions for RNA: ENST00000239243.6

MSX2-201, Transcript of msh homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX2, Length 2,241 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-201ENST00000239243 A0A1W2PRG0 241 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 SKILP12757 684 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 VSTM4Q8IW00 320 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 TEX2Q8IWB9 1127 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 DPF2Q92785 391 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 MYOZ2Q9NPC6 264 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 EDIL3O43854 480 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 RPS12P25398 132 aaKnown RBP26.19■■□□□ 1.78
MSX2-201ENST00000239243 USP11P51784 963 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 RWDD2AQ9UIY3 292 aa26.19■■□□□ 1.78
MSX2-201ENST00000239243 WNT10BO00744 389 aa26.18■■□□□ 1.78
MSX2-201ENST00000239243 ARID5BQ14865 1188 aa26.18■■□□□ 1.78
MSX2-201ENST00000239243 TMEM39BQ9GZU3 492 aa26.18■■□□□ 1.78
MSX2-201ENST00000239243 SAMSN1Q9NSI8 373 aaKnown RBP26.18■■□□□ 1.78
MSX2-201ENST00000239243 STK17AQ9UEE5 414 aa26.18■■□□□ 1.78
MSX2-201ENST00000239243 STAT2P52630 851 aa26.18■■□□□ 1.78
MSX2-201ENST00000239243 CCZ1BP86790 482 aa26.18■■□□□ 1.78
MSX2-201ENST00000239243 CCZ1P86791 482 aaPredicted RBP26.18■■□□□ 1.78
MSX2-201ENST00000239243 SMYD4Q8IYR2 804 aaPredicted RBP26.18■■□□□ 1.78
MSX2-201ENST00000239243 CTAGE1Q96RT6 745 aa26.18■■□□□ 1.78
MSX2-201ENST00000239243 PAK1Q13153 545 aa26.17■■□□□ 1.78
MSX2-201ENST00000239243 TPD52L1Q16890 204 aaPredicted RBP26.17■■□□□ 1.78
MSX2-201ENST00000239243 MOXD1Q6UVY6 613 aa26.17■■□□□ 1.78
MSX2-201ENST00000239243 ANO3Q9BYT9 981 aa26.17■■□□□ 1.78
MSX2-201ENST00000239243 CTNND2Q9UQB3 1225 aa26.17■■□□□ 1.78
MSX2-201ENST00000239243 R3HCC1Q9Y3T6 440 aaKnown RBP26.17■■□□□ 1.78
MSX2-201ENST00000239243 MYH7BA7E2Y1 1941 aa26.17■■□□□ 1.78
MSX2-201ENST00000239243 FOSP01100 380 aaPredicted RBP26.16■■□□□ 1.78
MSX2-201ENST00000239243 CDK5RAP3Q96JB5 506 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 PLIN2Q99541 437 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 MMTAG2Q9BU76 263 aaKnown RBP26.16■■□□□ 1.78
MSX2-201ENST00000239243 CD2APQ9Y5K6 639 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L15C9J2P7 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L13C9JLJ4 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L11C9JVI0 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L18D6R9N7 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L22D6RA61 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L17D6RBQ6 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L19D6RCP7 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L20D6RJB6 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 NFKBIEO00221 500 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 RHOBTB3O94955 611 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 MAP3K10Q02779 954 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L24Q0WX57 530 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 STIM1Q13586 685 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 CDKAL1Q5VV42 579 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 USP17L6PQ6QN14 398 aa26.16■■□□□ 1.78
MSX2-201ENST00000239243 LTBP3Q9NS15 1303 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 MARCH6O60337 910 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 CAP2P40123 477 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 ECE1P42892 770 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 STX17P56962 302 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 TNFAIP1Q13829 316 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 KRT79Q5XKE5 535 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 C7orf25Q9BPX7 421 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 PRR12Q9ULL5 1215 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 MEIS2O14770 477 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 ZNF280AP59817 542 aaPredicted RBP26.15■■□□□ 1.78
MSX2-201ENST00000239243 NBPF9Q3BBW0 867 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 KMT5BQ4FZB7 885 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 HSP90AA4PQ58FG1 418 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 ARMCX5Q6P1M9 558 aa26.15■■□□□ 1.78
MSX2-201ENST00000239243 PPP1R1BQ9UD71 204 aaPredicted RBP26.15■■□□□ 1.78
MSX2-201ENST00000239243 SPICE1Q8N0Z3 855 aa26.14■■□□□ 1.78
MSX2-201ENST00000239243 TRIM9Q9C026 710 aa26.14■■□□□ 1.78
MSX2-201ENST00000239243 CYP3A7-CYP3A51PA0A087WV96 503 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 KLRC4O43908 158 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 ASNSP08243 561 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 CYP3A7P24462 503 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 PPP1R2P41236 205 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 SPAG1Q07617 926 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 CCDC112Q8NEF3 446 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 ACER1Q8TDN7 264 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 CHURC1Q8WUH1 139 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 PGAP2Q9UHJ9 254 aa26.14■■□□□ 1.77
MSX2-201ENST00000239243 A0A1B0GTH6 734 aa26.13■■□□□ 1.77
MSX2-201ENST00000239243 KCNJ6P48051 423 aa26.13■■□□□ 1.77
MSX2-201ENST00000239243 NELFBQ8WX92 580 aa26.13■■□□□ 1.77
MSX2-201ENST00000239243 LRRC27Q9C0I9 530 aa26.13■■□□□ 1.77
MSX2-201ENST00000239243 VCPKMTQ9H867 229 aa26.13■■□□□ 1.77
MSX2-201ENST00000239243 INTS13Q9NVM9 706 aa26.13■■□□□ 1.77
MSX2-201ENST00000239243 SPDYE3A6NKU9 549 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 SLC26A4O43511 780 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 PLA2G6O60733 806 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 USH1GQ495M9 461 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 FILIP1LQ4L180 1135 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 SV2BQ7L1I2 683 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 ADSSL1Q8N142 457 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 GIMAP8Q8ND71 665 aaPredicted RBP26.12■■□□□ 1.77
MSX2-201ENST00000239243 SNX29Q8TEQ0 813 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 LRRC15Q8TF66 581 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 MBOAT7Q96N66 472 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 PCDHA12Q9UN75 941 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 PRCPP42785 496 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 GRB10Q13322 594 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 NR1I3Q14994 352 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 SPECC1LQ69YQ0 1117 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 MIGA2Q7L4E1 593 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 HAS1Q92839 578 aa26.12■■□□□ 1.77
MSX2-201ENST00000239243 KCND1Q9NSA2 647 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms