RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 PRPHP41219 470 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 GNAQP50148 359 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 DNM2P50570 870 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 HEATR3Q7Z4Q2 680 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 TXNRD3Q86VQ6 643 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 RPGRQ92834 1020 aaKnown RBP17.38■□□□□ 0.37
CTSD-201ENST00000236671 ANKRD2Q9GZV1 360 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 MAGEC2Q9UBF1 373 aaPredicted RBP17.38■□□□□ 0.37
CTSD-201ENST00000236671 TFR2Q9UP52 801 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 CD2APQ9Y5K6 639 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 USP17L3A6NCW0 530 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 USP17L4A6NCW7 530 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 ENC1O14682 589 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 ATP1A1P05023 1023 aaKnown RBP17.38■□□□□ 0.37
CTSD-201ENST00000236671 USP17L1Q7RTZ2 530 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 DZIP1Q86YF9 867 aaKnown RBP17.38■□□□□ 0.37
CTSD-201ENST00000236671 DHTKD1Q96HY7 919 aaPredicted RBP17.38■□□□□ 0.37
CTSD-201ENST00000236671 EXOC1Q9NV70 894 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 VPS18Q9P253 973 aa17.38■□□□□ 0.37
CTSD-201ENST00000236671 RASSF10A6NK89 507 aa17.37■□□□□ 0.37
CTSD-201ENST00000236671 LMAN1P49257 510 aa17.37■□□□□ 0.37
CTSD-201ENST00000236671 CCDC122Q5T0U0 273 aa17.37■□□□□ 0.37
CTSD-201ENST00000236671 PAPD7Q5XG87 772 aaKnown RBP17.37■□□□□ 0.37
CTSD-201ENST00000236671 CSGALNACT2Q8N6G5 542 aa17.37■□□□□ 0.37
CTSD-201ENST00000236671 TUBGCP2Q9BSJ2 902 aa17.37■□□□□ 0.37
CTSD-201ENST00000236671 PLCG1P19174 1290 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 KRT83P78385 493 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 IRX5P78411 483 aaPredicted RBP17.36■□□□□ 0.37
CTSD-201ENST00000236671 ZSCAN26Q16670 478 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 TSR1Q2NL82 804 aaKnown RBP17.36■□□□□ 0.37
CTSD-201ENST00000236671 CUEDC2Q9H467 287 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 MAGEF1Q9HAY2 307 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 TCP11L1Q9NUJ3 509 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 AGPAT5Q9NUQ2 364 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 BCS1LQ9Y276 419 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 MYH1P12882 1939 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 PALM3A6NDB9 673 aaPredicted RBP17.36■□□□□ 0.37
CTSD-201ENST00000236671 ZBTB22O15209 634 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 KLK7P49862 253 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 USP14P54578 494 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 P2RX5Q93086 422 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 MMS19Q96T76 1030 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 SAR1BQ9Y6B6 198 aa17.36■□□□□ 0.37
CTSD-201ENST00000236671 RCCD1A6NED2 376 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 LRRIQ3A6PVS8 624 aaPredicted RBP17.35■□□□□ 0.37
CTSD-201ENST00000236671 YBX3P16989 372 aaKnown RBP eCLIP17.35■□□□□ 0.371e-6■■□□□ 11.5
CTSD-201ENST00000236671 CCNE1P24864 410 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 RAD51AP2Q09MP3 1159 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 CCDC178Q5BJE1 867 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 SPTY2D1Q68D10 685 aaPredicted RBP17.35■□□□□ 0.37
CTSD-201ENST00000236671 CABP7Q86V35 215 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 EHBP1Q8NDI1 1231 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 SH3RF3Q8TEJ3 882 aaPredicted RBP17.35■□□□□ 0.37
CTSD-201ENST00000236671 JAKMIP2Q96AA8 810 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 CNOT6LQ96LI5 555 aaKnown RBP17.35■□□□□ 0.37
CTSD-201ENST00000236671 AK8Q96MA6 479 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 NUP58Q9BVL2 599 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 TRIM9Q9C026 710 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 FAN1Q9Y2M0 1017 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 TSPY3P0CV98 308 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 TSPY8P0CW00 308 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 TRIM21P19474 475 aaKnown RBP17.35■□□□□ 0.37
CTSD-201ENST00000236671 KIAA1328Q86T90 577 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 RETREG2Q8NC44 543 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 GOLGA5Q8TBA6 731 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 ZBTB9Q96C00 473 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 MASTLQ96GX5 879 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 LACRTQ9GZZ8 138 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 MKNK2Q9HBH9 465 aa17.35■□□□□ 0.37
CTSD-201ENST00000236671 BICDL2A1A5D9 508 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 EIF3CLB5ME19 914 aaKnown RBP17.34■□□□□ 0.37
CTSD-201ENST00000236671 C21orf2O43822 256 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 SRGAP2O75044 1071 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 OR52Z1P0C646 297 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 NPR1P16066 1061 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 CYLC1P35663 651 aaPredicted RBP17.34■□□□□ 0.37
CTSD-201ENST00000236671 TGFB2P61812 414 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 ZBED6P86452 979 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 STK4Q13043 487 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 MIIPQ5JXC2 388 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 ANKRD40Q6AI12 368 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 SLC44A5Q8NCS7 719 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 FAM71BQ8TC56 605 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 EIF3CQ99613 913 aaKnown RBP17.34■□□□□ 0.37
CTSD-201ENST00000236671 C7orf25Q9BPX7 421 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 TMEM47Q9BQJ4 181 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 ZMYND12Q9H0C1 365 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 NHEJ1Q9H9Q4 299 aaPredicted RBP17.34■□□□□ 0.37
CTSD-201ENST00000236671 NAV1Q8NEY1 1877 aa17.34■□□□□ 0.37
CTSD-201ENST00000236671 KRT86O43790 486 aa17.33■□□□□ 0.37
CTSD-201ENST00000236671 PDE4DQ08499 809 aa17.33■□□□□ 0.37
CTSD-201ENST00000236671 ZSCAN29Q8IWY8 852 aaPredicted RBP17.33■□□□□ 0.37
CTSD-201ENST00000236671 CCDC170Q8IYT3 715 aa17.33■□□□□ 0.37
CTSD-201ENST00000236671 EEF2KMTQ96G04 330 aa17.33■□□□□ 0.37
CTSD-201ENST00000236671 PURBQ96QR8 312 aaKnown RBP17.33■□□□□ 0.37
CTSD-201ENST00000236671 GOLGA8HP0CJ92 632 aa17.33■□□□□ 0.36
CTSD-201ENST00000236671 CAPN2P17655 700 aa17.33■□□□□ 0.36
CTSD-201ENST00000236671 ACTN2P35609 894 aa17.33■□□□□ 0.36
CTSD-201ENST00000236671 TBC1D8BQ0IIM8 1120 aa17.33■□□□□ 0.36
CTSD-201ENST00000236671 LZTS2Q9BRK4 669 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms