RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 NEDD1Q8NHV4 660 aa10.24□□□□□ -0.77
SYDE2-201ENST00000234668 TBC1D16Q8TBP0 767 aa10.24□□□□□ -0.77
SYDE2-201ENST00000234668 RABGGTAQ92696 567 aa10.24□□□□□ -0.77
SYDE2-201ENST00000234668 ZFP91Q96JP5 570 aaPredicted RBP10.24□□□□□ -0.77
SYDE2-201ENST00000234668 NAPGQ99747 312 aaPredicted RBP10.24□□□□□ -0.77
SYDE2-201ENST00000234668 NAA15Q9BXJ9 866 aaKnown RBP10.24□□□□□ -0.77
SYDE2-201ENST00000234668 SEMA6BQ9H3T3 888 aa10.24□□□□□ -0.77
SYDE2-201ENST00000234668 ABCB6Q9NP58 842 aa10.24□□□□□ -0.77
SYDE2-201ENST00000234668 SH3GLB2Q9NR46 395 aa10.24□□□□□ -0.77
SYDE2-201ENST00000234668 GPR75-ASB3A0A0A6YYF3 556 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 EDIL3O43854 480 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 ATP1A1P05023 1023 aaKnown RBP10.23□□□□□ -0.77
SYDE2-201ENST00000234668 HERVK_113P62684 666 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 VSNL1P62760 191 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 APBA1Q02410 837 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 SPAG1Q07617 926 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 STIM1Q13586 685 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 ECM1Q16610 540 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 TSR1Q2NL82 804 aaKnown RBP10.23□□□□□ -0.77
SYDE2-201ENST00000234668 C16orf86Q6ZW13 317 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 KIAA1328Q86T90 577 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 ZFPM1Q8IX07 1006 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 ZNF507Q8TCN5 953 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 ANKS1AQ92625 1134 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 P2RX5Q93086 422 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 FUT8Q9BYC5 575 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 LRWD1Q9UFC0 647 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 DAGLAQ9Y4D2 1042 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 H3BQF6 201 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 MARCH6O60337 910 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 RHOBTB3O94955 611 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 PDHBP11177 359 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 GYS1P13807 737 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 CCSER1Q9C0I3 900 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 PLEKHA4Q9H4M7 779 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 MMRN2Q9H8L6 949 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 TTF2Q9UNY4 1162 aaKnown RBP10.23□□□□□ -0.77
SYDE2-201ENST00000234668 DNA2P51530 1060 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 CALCRLQ16602 461 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 CT47A1Q5JQC4 288 aaPredicted RBP10.23□□□□□ -0.77
SYDE2-201ENST00000234668 PDE11AQ9HCR9 933 aa10.23□□□□□ -0.77
SYDE2-201ENST00000234668 NPHP3-ACAD11A0A0J9YXS1 232 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L15C9J2P7 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 TOM1O60784 492 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 GNA11P29992 359 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 NFIAQ12857 509 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 GRB10Q13322 594 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CCDC96Q2M329 555 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 TMED8Q6PL24 325 aaPredicted RBP10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L6PQ6QN14 398 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 GSPT2Q8IYD1 628 aaKnown RBP10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CERS5Q8N5B7 392 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CDK5RAP3Q96JB5 506 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 MMS19Q96T76 1030 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 ZHX3Q9H4I2 956 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 SMARCAL1Q9NZC9 954 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 MYO6Q9UM54 1294 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 ITIH6Q6UXX5 1313 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CTAGE15A4D2H0 777 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 USP17L10C9JJH3 530 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 PPP1R11O60927 126 aaPredicted RBP10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CTAGE8P0CG41 777 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 SKIDA1Q1XH10 827 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 SLC30A10Q6XR72 485 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 KRT25Q7Z3Z0 450 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CTAGE6Q86UF2 777 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CTAGE4Q8IX94 777 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 PNMA5Q96PV4 448 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CRACR2AQ9BSW2 395 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 NHEJ1Q9H9Q4 299 aaPredicted RBP10.22□□□□□ -0.77
SYDE2-201ENST00000234668 BLOC1S4Q9NUP1 217 aa10.22□□□□□ -0.77
SYDE2-201ENST00000234668 CCNE1P24864 410 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 CXCR5P32302 372 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 MATR3P43243 847 aaKnown RBP eCLIP10.21□□□□□ -0.77
SYDE2-201ENST00000234668 DDR1Q08345 913 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 NELFCDQ8IXH7 590 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 SNX29Q8TEQ0 813 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 CCDC51Q96ER9 411 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 CALML4Q96GE6 196 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 PYM1Q9BRP8 204 aaKnown RBP10.21□□□□□ -0.77
SYDE2-201ENST00000234668 SPZ1Q9BXG8 430 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 FGFBP2Q9BYJ0 223 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 TANGO6Q9C0B7 1094 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 USP40Q9NVE5 1235 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 MTMR4Q9NYA4 1195 aa10.21□□□□□ -0.77
SYDE2-201ENST00000234668 PDS5AQ29RF7 1337 aaKnown RBP10.21□□□□□ -0.77
SYDE2-201ENST00000234668 SNED1Q8TER0 1413 aa10.21□□□□□ -0.78
SYDE2-201ENST00000234668 KIF20AO95235 890 aa10.21□□□□□ -0.78
SYDE2-201ENST00000234668 KCNB1Q14721 858 aa10.21□□□□□ -0.78
SYDE2-201ENST00000234668 MIIPQ5JXC2 388 aa10.21□□□□□ -0.78
SYDE2-201ENST00000234668 SAMD1Q6SPF0 538 aaPredicted RBP10.21□□□□□ -0.78
SYDE2-201ENST00000234668 SV2BQ7L1I2 683 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms