RNA–Protein interactions for RNA: ENST00000233573.6

ITGA4-201, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-201ENST00000233573 ARMCX5Q6P1M9 558 aa18.02■□□□□ 0.48
ITGA4-201ENST00000233573 SMYD4Q8IYR2 804 aaPredicted RBP18.02■□□□□ 0.48
ITGA4-201ENST00000233573 TEPSINQ96N21 525 aa18.02■□□□□ 0.48
ITGA4-201ENST00000233573 NUP88Q99567 741 aaPredicted RBP18.02■□□□□ 0.48
ITGA4-201ENST00000233573 SAMSN1Q9NSI8 373 aaKnown RBP18.02■□□□□ 0.48
ITGA4-201ENST00000233573 TDP2O95551 362 aa18.02■□□□□ 0.47
ITGA4-201ENST00000233573 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.47
ITGA4-201ENST00000233573 MRPL12P52815 198 aaKnown RBP18.02■□□□□ 0.47
ITGA4-201ENST00000233573 CDC37Q16543 378 aaPredicted RBP18.02■□□□□ 0.47
ITGA4-201ENST00000233573 SPATA1Q5VX52 437 aa18.02■□□□□ 0.47
ITGA4-201ENST00000233573 PPP4R3AQ6IN85 833 aa18.02■□□□□ 0.47
ITGA4-201ENST00000233573 VSTM4Q8IW00 320 aa18.02■□□□□ 0.47
ITGA4-201ENST00000233573 PSTPIP2Q9H939 334 aa18.02■□□□□ 0.47
ITGA4-201ENST00000233573 ZBTB21Q9ULJ3 1066 aa18.02■□□□□ 0.47
ITGA4-201ENST00000233573 RPN1P04843 607 aaKnown RBP18.01■□□□□ 0.47
ITGA4-201ENST00000233573 MYL1P05976 194 aa18.01■□□□□ 0.47
ITGA4-201ENST00000233573 ECE1P42892 770 aa18.01■□□□□ 0.47
ITGA4-201ENST00000233573 TNNI2P48788 182 aa18.01■□□□□ 0.47
ITGA4-201ENST00000233573 FXR2P51116 673 aaKnown RBP eCLIP18.01■□□□□ 0.47
ITGA4-201ENST00000233573 BTNL9Q6UXG8 535 aa18.01■□□□□ 0.47
ITGA4-201ENST00000233573 CCDC84Q86UT8 332 aaPredicted RBP18.01■□□□□ 0.47
ITGA4-201ENST00000233573 CABP7Q86V35 215 aa18.01■□□□□ 0.47
ITGA4-201ENST00000233573 CUEDC2Q9H467 287 aa18.01■□□□□ 0.47
ITGA4-201ENST00000233573 SYNRGQ9UMZ2 1314 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 KLRC4O43908 158 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 SKILP12757 684 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 PLCG1P19174 1290 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 EPS15P42566 896 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 TECP42680 631 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 ZNF658Q5TYW1 1059 aaPredicted RBP18■□□□□ 0.47
ITGA4-201ENST00000233573 CDKAL1Q5VV42 579 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 APTXQ7Z2E3 356 aaKnown RBP18■□□□□ 0.47
ITGA4-201ENST00000233573 ACER1Q8TDN7 264 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 MAGEF1Q9HAY2 307 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 GPRC5DQ9NZD1 345 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 RNF181Q9P0P0 153 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 R3HCC1Q9Y3T6 440 aaKnown RBP18■□□□□ 0.47
ITGA4-201ENST00000233573 PCDHA1Q9Y5I3 950 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 TMEM232C9JQI7 657 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 H7C1D1 291 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 TBC1D12O60347 775 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 MMP14P50281 582 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 CALCRLQ16602 461 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 SPICE1Q8N0Z3 855 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 GPC2Q8N158 579 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 CCDC150Q8NCX0 1101 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 GLT8D2Q9H1C3 349 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 RMND1Q9NWS8 449 aa18■□□□□ 0.47
ITGA4-201ENST00000233573 DDNO94850 711 aaPredicted RBP17.99■□□□□ 0.47
ITGA4-201ENST00000233573 TNFAIP1Q13829 316 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 KCNB1Q14721 858 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 HSP90AA4PQ58FG1 418 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 ANGEL2Q5VTE6 544 aaKnown RBP17.99■□□□□ 0.47
ITGA4-201ENST00000233573 PRAMEF18Q5VWM3 479 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 DEFB129Q9H1M3 183 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 BMP3P12645 472 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 TXKP42681 527 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 SEMA3FQ13275 785 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 DHX8Q14562 1220 aaKnown RBP17.99■□□□□ 0.47
ITGA4-201ENST00000233573 KIAA1755Q5JYT7 1200 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 KLHL10Q6JEL2 608 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 PLIN2Q99541 437 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 KCND1Q9NSA2 647 aa17.99■□□□□ 0.47
ITGA4-201ENST00000233573 ATAD5Q96QE3 1844 aa17.98■□□□□ 0.47
ITGA4-201ENST00000233573 CAP2P40123 477 aa17.98■□□□□ 0.47
ITGA4-201ENST00000233573 STX17P56962 302 aa17.98■□□□□ 0.47
ITGA4-201ENST00000233573 SYDE2Q5VT97 1194 aa17.98■□□□□ 0.47
ITGA4-201ENST00000233573 GLIS2Q9BZE0 524 aaPredicted RBP17.98■□□□□ 0.47
ITGA4-201ENST00000233573 A0A1B0GTH6 734 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L15C9J2P7 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L13C9JLJ4 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L11C9JVI0 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L18D6R9N7 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L22D6RA61 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L17D6RBQ6 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L19D6RCP7 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L20D6RJB6 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 MEIS2O14770 477 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 HIRAP54198 1017 aaPredicted RBP17.97■□□□□ 0.47
ITGA4-201ENST00000233573 MAP3K10Q02779 954 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L24Q0WX57 530 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 TBX2Q13207 712 aaPredicted RBP17.97■□□□□ 0.47
ITGA4-201ENST00000233573 PDIA5Q14554 519 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 NBPF12Q5TAG4 269 aaPredicted RBP17.97■□□□□ 0.47
ITGA4-201ENST00000233573 USP17L6PQ6QN14 398 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 RASSF8Q8NHQ8 419 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 CRYGNQ8WXF5 182 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 HAS1Q92839 578 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 RWDD2AQ9UIY3 292 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 TMX2Q9Y320 296 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 PHF20L1A8MW92 1017 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 RHOBTB3O94955 611 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 GCFC2P16383 781 aaKnown RBP17.97■□□□□ 0.47
ITGA4-201ENST00000233573 CDK11BP21127 795 aaKnown RBP17.97■□□□□ 0.47
ITGA4-201ENST00000233573 SNAP25P60880 206 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 GRB10Q13322 594 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 NR1I3Q14994 352 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 ZYXQ15942 572 aaKnown RBP17.97■□□□□ 0.47
ITGA4-201ENST00000233573 KMT5BQ4FZB7 885 aa17.97■□□□□ 0.47
ITGA4-201ENST00000233573 P2RX7Q99572 595 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms