RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 UFL1O94874 794 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 CASP14P31944 242 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 PRCPP42785 496 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 NAPAP54920 295 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 GPSM2P81274 684 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 AMPD3Q01432 767 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 KARSQ15046 597 aaKnown RBP11.09□□□□□ -0.63
MDH1-201ENST00000233114 DIXDC1Q155Q3 683 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 INF2Q27J81 1249 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 SOGA3Q5TF21 947 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 PPP1R18Q6NYC8 613 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 TMCO3Q6UWJ1 677 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 RAD9BQ6WBX8 426 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 RSRC2Q7L4I2 434 aaKnown RBP11.09□□□□□ -0.63
MDH1-201ENST00000233114 RETREG2Q8NC44 543 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 CRAMP1Q96RY5 1269 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 C7orf25Q9BPX7 421 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 MRPL44Q9H9J2 332 aaKnown RBP11.09□□□□□ -0.63
MDH1-201ENST00000233114 ABHD10Q9NUJ1 306 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 FLT1P17948 1338 aa11.09□□□□□ -0.63
MDH1-201ENST00000233114 PPP1R37O75864 691 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 KIF20AO95235 890 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 ASPRV1Q53RT3 343 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 ZNF662Q6ZS27 426 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 SMIM5Q71RC9 77 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 NEK8Q86SG6 692 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 MAPKAPK5Q8IW41 473 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 CEP112Q8N8E3 955 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 RASSF8Q8NHQ8 419 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 GOLGA1Q92805 767 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 TMEM60Q9H2L4 133 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 MAGEC2Q9UBF1 373 aaPredicted RBP11.08□□□□□ -0.64
MDH1-201ENST00000233114 USP21Q9UK80 565 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 STX8Q9UNK0 236 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 ADAMTS3O15072 1205 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 ZRANB2O95218 330 aaKnown RBP eCLIP11.08□□□□□ -0.64
MDH1-201ENST00000233114 TUBBP07437 444 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
MDH1-201ENST00000233114 DNM2P50570 870 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 FXR1P51114 621 aaKnown RBP eCLIP11.08□□□□□ -0.64
MDH1-201ENST00000233114 RHBDL3P58872 404 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 PIP4K2BP78356 416 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 PTPN21Q16825 1174 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 TTI2Q6NXR4 508 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 FOXR2Q6PJQ5 311 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 FAM196AQ6ZSG2 479 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 CABP7Q86V35 215 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 AMIGO3Q86WK7 504 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 CCDC24Q8N4L8 307 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 LRRN4CLQ8ND94 238 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 RASGRP4Q8TDF6 673 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 STAMQ92783 540 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 DESI2Q9BSY9 194 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 NUP58Q9BVL2 599 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 RIOX1Q9H6W3 641 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 ZNF446Q9NWS9 450 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 STK17AQ9UEE5 414 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 CDC23Q9UJX2 597 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 JAG2Q9Y219 1238 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 GDAQ9Y2T3 454 aa11.08□□□□□ -0.64
MDH1-201ENST00000233114 KLRG2A4D1S0 409 aaPredicted RBP11.07□□□□□ -0.64
MDH1-201ENST00000233114 SMCO2A6NFE2 343 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 SLC26A4O43511 780 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 ONECUT3O60422 494 aaPredicted RBP11.07□□□□□ -0.64
MDH1-201ENST00000233114 CCNE1P24864 410 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 MTF1Q14872 753 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 GRIK5Q16478 980 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 SLC27A3Q5K4L6 730 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 CNNM4Q6P4Q7 775 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 SRGAP1Q7Z6B7 1085 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 IRF2BP1Q8IU81 584 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 MB21D1Q8N884 522 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 SLC44A5Q8NCS7 719 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 OR8K1Q8NGG5 319 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 ZNF507Q8TCN5 953 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 NUP88Q99567 741 aaPredicted RBP11.07□□□□□ -0.64
MDH1-201ENST00000233114 DNAJC7Q99615 494 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 LRRC27Q9C0I9 530 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 EXOC1Q9NV70 894 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 TAB2Q9NYJ8 693 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 SAP30BPQ9UHR5 308 aaKnown RBP11.07□□□□□ -0.64
MDH1-201ENST00000233114 ABCB11O95342 1321 aa11.07□□□□□ -0.64
MDH1-201ENST00000233114 CTAGE9A4FU28 777 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 PNMA6AP0CW24 399 aaPredicted RBP11.06□□□□□ -0.64
MDH1-201ENST00000233114 PLCG1P19174 1290 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 KRT9P35527 623 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 UBXN1Q04323 297 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 BRD3Q15059 726 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 WHAMMP3Q1A5X7 153 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 TSR1Q2NL82 804 aaKnown RBP11.06□□□□□ -0.64
MDH1-201ENST00000233114 FIGNQ5HY92 759 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 MFSD14BQ5SR56 506 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 REXO1Q8N1G1 1221 aaKnown RBP11.06□□□□□ -0.64
MDH1-201ENST00000233114 CPLX3Q8WVH0 158 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 CALML4Q96GE6 196 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 TRIM47Q96LD4 638 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 NAP1L4Q99733 375 aaKnown RBP11.06□□□□□ -0.64
MDH1-201ENST00000233114 RAB34Q9BZG1 259 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 TRIM9Q9C026 710 aa11.06□□□□□ -0.64
MDH1-201ENST00000233114 VPS16Q9H269 839 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms