RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 PCMTD1Q96MG8 357 aaPredicted RBP15.67■□□□□ 0.1
SF1-201ENST00000227503 VCPKMTQ9H867 229 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 NHEJ1Q9H9Q4 299 aaPredicted RBP15.67■□□□□ 0.1
SF1-201ENST00000227503 STRCQ7RTU9 1775 aa15.67■□□□□ 0.1
SF1-201ENST00000227503 CYP2D7A0A087X1C5 515 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 WTIPA6NIX2 430 aaPredicted RBP15.66■□□□□ 0.1
SF1-201ENST00000227503 ERCC3P19447 782 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 PRCPP42785 496 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 GYG1P46976 350 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 HAUS3Q68CZ6 603 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 MYCBPAPQ8TBZ2 947 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 NIP7Q9Y221 180 aaKnown RBP eCLIP15.66■□□□□ 0.1
SF1-201ENST00000227503 V9GY48 417 aaPredicted RBP15.66■□□□□ 0.1
SF1-201ENST00000227503 MYH6P13533 1939 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 DOT1LQ8TEK3 1739 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 COL14A1Q05707 1796 aaKnown RBP15.66■□□□□ 0.1
SF1-201ENST00000227503 DUOX1Q9NRD9 1551 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 FGRP09769 529 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 XBP1P17861 261 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 SKOR1P84550 965 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 TROAPQ12815 778 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 NPY5RQ15761 445 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 TSR1Q2NL82 804 aaKnown RBP15.66■□□□□ 0.1
SF1-201ENST00000227503 NLRP14Q86W24 1093 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 PROCA1Q8NCQ7 364 aaPredicted RBP15.66■□□□□ 0.1
SF1-201ENST00000227503 TNFRSF25Q93038 417 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 CCDC114Q96M63 670 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 PLIN2Q99541 437 aa15.66■□□□□ 0.1
SF1-201ENST00000227503 RBM12Q9NTZ6 932 aaKnown RBP15.66■□□□□ 0.1
SF1-201ENST00000227503 DYNLL1P63167 89 aaKnown RBP15.65■□□□□ 0.1
SF1-201ENST00000227503 MB21D1Q8N884 522 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 GSDMAQ96QA5 445 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 EPN3Q9H201 632 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 CACNA1SQ13698 1873 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 TRIM21P19474 475 aaKnown RBP15.65■□□□□ 0.1
SF1-201ENST00000227503 SATB1Q01826 763 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 PTGISQ16647 500 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 LRCH2Q5VUJ6 765 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 CCDC70Q6NSX1 233 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 ZNF384Q8TF68 577 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 SNX12Q9UMY4 172 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 LAMB2P55268 1798 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 C21orf2O43822 256 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 RASSF9O75901 435 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 GLI1P08151 1106 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 NR1D1P20393 614 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 CDC25CP30307 473 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 CLNS1AP54105 237 aaKnown RBP15.65■□□□□ 0.1
SF1-201ENST00000227503 ITPK1Q13572 414 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 IFIT1BQ5T764 474 aaKnown RBP15.65■□□□□ 0.1
SF1-201ENST00000227503 CATIPQ7Z7H3 387 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 OR2W6PQ8NHA6 318 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 FERMT2Q96AC1 680 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 BRIP1Q9BX63 1249 aa15.65■□□□□ 0.1
SF1-201ENST00000227503 DNM1LO00429 736 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 PPP1R37O75864 691 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 EPHB4P54760 987 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 QPCTQ16769 361 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 CHADLQ6NUI6 762 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 TBC1D31Q96DN5 1066 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 RPGRIP1Q96KN7 1286 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 RBM28Q9NW13 759 aaKnown RBP15.64■□□□□ 0.09
SF1-201ENST00000227503 STIM2Q9P246 746 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 LRRC10BA6NIK2 292 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 SEMA3EO15041 775 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 CFAP58Q5T655 872 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 CCDC181Q5TID7 509 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 DNAJC7Q99615 494 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 RREB1Q92766 1687 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 MYH2Q9UKX2 1941 aa15.64■□□□□ 0.09
SF1-201ENST00000227503 RASSF10A6NK89 507 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 BMP15O95972 392 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 TMOD1P28289 359 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 CDR1P51861 262 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 C8orf74Q6P047 294 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 TMTC3Q6ZXV5 915 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 TMC4Q7Z404 712 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 A1CFQ9NQ94 594 aaKnown RBP15.63■□□□□ 0.09
SF1-201ENST00000227503 RWDD2AQ9UIY3 292 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 TPX2Q9ULW0 747 aaKnown RBP15.63■□□□□ 0.09
SF1-201ENST00000227503 LOC102724428A0A0B4J2F2 783 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 BUB1O43683 1085 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 IPO7O95373 1038 aaKnown RBP15.63■□□□□ 0.09
SF1-201ENST00000227503 SMTNP53814 917 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 SIK1P57059 783 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 KRT83P78385 493 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 GUCY2DQ02846 1103 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 KIF5AQ12840 1032 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 NAA25Q14CX7 972 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 ACCSLQ4AC99 568 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 TYW1BQ6NUM6 668 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 CYB5D1Q6P9G0 228 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 C3orf67Q6ZVT6 689 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 MAATS1Q7Z4T9 603 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 OSBPL9Q96SU4 736 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 EPB41L5Q9HCM4 733 aa15.63■□□□□ 0.09
SF1-201ENST00000227503 ADAMTS3O15072 1205 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 TRIM14Q14142 442 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 MMGT1Q8N4V1 131 aa15.62■□□□□ 0.09
SF1-201ENST00000227503 OSBPL7Q9BZF2 842 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms