RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 CCDC42Q96M95 316 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 ZIM3Q96PE6 472 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 TMEM60Q9H2L4 133 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 ABCA3Q99758 1704 aa17.21■□□□□ 0.35
VTN-201ENST00000226218 FLT1P17948 1338 aa17.21■□□□□ 0.34
VTN-201ENST00000226218 BICDL2A1A5D9 508 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 CALML3P27482 149 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 SPA17Q15506 151 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 CCDC96Q2M329 555 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 COBLL1Q53SF7 1204 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 FAM114A1Q8IWE2 563 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 IFIH1Q9BYX4 1025 aaKnown RBP17.2■□□□□ 0.34
VTN-201ENST00000226218 RABEP2Q9H5N1 569 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 ZBTB1Q9Y2K1 713 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 SIK3Q9Y2K2 1263 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 ORC4O43929 436 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 HSF2BPO75031 334 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 KIF11P52732 1056 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 PDCLQ13371 301 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 KDM7AQ6ZMT4 941 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 DTHD1Q6ZMT9 781 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 IQCKQ8N0W5 287 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 NOC4LQ9BVI4 516 aaKnown RBP17.2■□□□□ 0.34
VTN-201ENST00000226218 GDF3Q9NR23 364 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 SH3GLB2Q9NR46 395 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 SMARCAL1Q9NZC9 954 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 PCDHA4Q9UN74 947 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 SAMM50Q9Y512 469 aa17.2■□□□□ 0.34
VTN-201ENST00000226218 CASZ1Q86V15 1759 aa17.19■□□□□ 0.34
VTN-201ENST00000226218 KDM4FA0A1W2PPD8 638 aa17.19■□□□□ 0.34
VTN-201ENST00000226218 FSBPO95073 299 aa17.19■□□□□ 0.34
VTN-201ENST00000226218 DYNLL1P63167 89 aaKnown RBP17.19■□□□□ 0.34
VTN-201ENST00000226218 MRPS25P82663 173 aaKnown RBP17.19■□□□□ 0.34
VTN-201ENST00000226218 GLE1Q53GS7 698 aaKnown RBP17.19■□□□□ 0.34
VTN-201ENST00000226218 TTC19Q6DKK2 380 aaPredicted RBP17.19■□□□□ 0.34
VTN-201ENST00000226218 CUEDC2Q9H467 287 aa17.19■□□□□ 0.34
VTN-201ENST00000226218 MAGEF1Q9HAY2 307 aa17.19■□□□□ 0.34
VTN-201ENST00000226218 EHD2Q9NZN4 543 aa17.19■□□□□ 0.34
VTN-201ENST00000226218 SALL4Q9UJQ4 1053 aa17.19■□□□□ 0.34
VTN-201ENST00000226218 EPHB6O15197 1021 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 NMT2O60551 498 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 STK4Q13043 487 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 B4GALNT4Q76KP1 1039 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 SPATS2Q86XZ4 545 aaKnown RBP17.18■□□□□ 0.34
VTN-201ENST00000226218 ZNF384Q8TF68 577 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 TLR10Q9BXR5 811 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 PRDM11Q9NQV5 511 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 MTIF2P46199 727 aaKnown RBP17.18■□□□□ 0.34
VTN-201ENST00000226218 EVX2Q03828 476 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 ASTE1Q2TB18 679 aaPredicted RBP17.18■□□□□ 0.34
VTN-201ENST00000226218 TYW1BQ6NUM6 668 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 CD302Q8IX05 232 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 MREGQ8N565 214 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 CCDC155Q8N6L0 562 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 TRIM9Q9C026 710 aa17.18■□□□□ 0.34
VTN-201ENST00000226218 RBM12Q9NTZ6 932 aaKnown RBP17.18■□□□□ 0.34
VTN-201ENST00000226218 EIF4A3P38919 411 aaKnown RBP17.17■□□□□ 0.34
VTN-201ENST00000226218 PPP1R2P41236 205 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 APBA1Q02410 837 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 CCDC91Q7Z6B0 441 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 SH2D3CQ8N5H7 860 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 C1orf131Q8NDD1 294 aaKnown RBP17.17■□□□□ 0.34
VTN-201ENST00000226218 RASGRP4Q8TDF6 673 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 PIK3R5Q8WYR1 880 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 EEF2KMTQ96G04 330 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 C7orf25Q9BPX7 421 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 ZNF233A6NK53 670 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 NDUFAB1O14561 156 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 MEFVO15553 781 aaPredicted RBP17.17■□□□□ 0.34
VTN-201ENST00000226218 PRPHP41219 470 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 UBA7P41226 1012 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 PDE4DQ08499 809 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 FKBP15Q5T1M5 1219 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 KLHDC7AQ5VTJ3 777 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 RCSD1Q6JBY9 416 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 C8orf74Q6P047 294 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 YTHDF3Q7Z739 585 aaKnown RBP17.17■□□□□ 0.34
VTN-201ENST00000226218 C2CD5Q86YS7 1000 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 DAGLBQ8NCG7 672 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 PCMTD1Q96MG8 357 aaPredicted RBP17.17■□□□□ 0.34
VTN-201ENST00000226218 ALS2CR12Q96Q35 445 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 RUFY1Q96T51 708 aa17.17■□□□□ 0.34
VTN-201ENST00000226218 LAD1O00515 517 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 NCK2O43639 380 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 CXCR5P32302 372 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 USP8P40818 1118 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 MATR3P43243 847 aaKnown RBP eCLIP17.16■□□□□ 0.34
VTN-201ENST00000226218 SUSD4Q5VX71 490 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 DZIP3Q86Y13 1208 aaKnown RBP17.16■□□□□ 0.34
VTN-201ENST00000226218 BAP1Q92560 729 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 RNPC3Q96LT9 517 aaKnown RBP17.16■□□□□ 0.34
VTN-201ENST00000226218 PLIN2Q99541 437 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 ABCF2Q9UG63 623 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 PCDHA6Q9UN73 950 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 PCDHA8Q9Y5H6 950 aa17.16■□□□□ 0.34
VTN-201ENST00000226218 GLI1P08151 1106 aa17.15■□□□□ 0.34
VTN-201ENST00000226218 FCER1AP12319 257 aa17.15■□□□□ 0.34
VTN-201ENST00000226218 PLCG1P19174 1290 aa17.15■□□□□ 0.34
VTN-201ENST00000226218 LSP1P33241 339 aa17.15■□□□□ 0.34
VTN-201ENST00000226218 CHRNDQ07001 517 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms