RNA–Protein interactions for RNA: ENST00000220888.9

TRPS1-201, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 1 (best) BASIC

Gene TRPS1, Length 5,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-201ENST00000220888 STAT2P52630 851 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 ZBTB9Q96C00 473 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 MAD1L1Q9Y6D9 718 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 BZW2Q9Y6E2 419 aaKnown RBP11.53□□□□□ -0.56
TRPS1-201ENST00000220888 SGSM2O43147 1006 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 ARHGAP6O43182 974 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 MIGA2Q7L4E1 593 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 MCUQ8NE86 351 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 ITM2BQ9Y287 266 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 MFAP3P55082 362 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 CDR2Q01850 454 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 PSMB7Q99436 277 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 FAM49AQ9H0Q0 323 aaPredicted RBP11.53□□□□□ -0.56
TRPS1-201ENST00000220888 TFAMQ00059 246 aaKnown RBP11.53□□□□□ -0.56
TRPS1-201ENST00000220888 DENND2CQ68D51 928 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 GPATCH11Q8N954 259 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 CEP120Q8N960 986 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 TRIML1Q8N9V2 468 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 FAM71BQ8TC56 605 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 TTC25Q96NG3 672 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 SERPINB13Q9UIV8 391 aa11.53□□□□□ -0.56
TRPS1-201ENST00000220888 SOS2Q07890 1332 aaPredicted RBP11.52□□□□□ -0.56
TRPS1-201ENST00000220888 KDM2BQ8NHM5 1336 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 PPFIA4O75335 1185 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 CIITAP33076 1130 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 FAM26FQ5R3K3 315 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 DCLK2Q8N568 766 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.56
TRPS1-201ENST00000220888 PI4K2BQ8TCG2 481 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 HVCN1Q96D96 273 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 MASTLQ96GX5 879 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 RAPGEF6Q8TEU7 1601 aa11.52□□□□□ -0.56
TRPS1-201ENST00000220888 KIF3CO14782 793 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 HGSO14964 777 aaPredicted RBP11.52□□□□□ -0.57
TRPS1-201ENST00000220888 ADAM9Q13443 819 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 LONRF3Q496Y0 759 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 PRAG1Q86YV5 1406 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 CMTR1Q8N1G2 835 aaKnown RBP11.52□□□□□ -0.57
TRPS1-201ENST00000220888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRPS1-201ENST00000220888 TMEM2Q9UHN6 1383 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 ZBTB7BO15156 539 aaPredicted RBP11.52□□□□□ -0.57
TRPS1-201ENST00000220888 C21orf2O43822 256 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 PSAPP07602 524 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 ARL4AP40617 200 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 MFSD14CQ5VZR4 134 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 KCTD1Q719H9 257 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 FAM160B2Q86V87 743 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 GJA10Q969M2 543 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 PPP1R16BQ96T49 567 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 LBHD1Q9BQE6 289 aaPredicted RBP11.52□□□□□ -0.57
TRPS1-201ENST00000220888 VCX3AQ9NNX9 186 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 SERTAD1Q9UHV2 236 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 KCNH4Q9UQ05 1017 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 TNNQ9UQP3 1299 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 MGEA5O60502 916 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 USP17L8P0C7I0 530 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 TROVE2P10155 538 aaKnown RBP eCLIP11.52□□□□□ -0.57
TRPS1-201ENST00000220888 EVCP57679 992 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 GOLGA8FQ08AF8 430 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 GOLGA8DPQ0D2H9 430 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 TTBK2Q6IQ55 1244 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 RFX6Q8HWS3 928 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 CCDC170Q8IYT3 715 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 CCNYQ8ND76 341 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 GREM2Q9H772 168 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 ASAP1Q9ULH1 1129 aa11.52□□□□□ -0.57
TRPS1-201ENST00000220888 MTERF2Q49AM1 385 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 CATSPER4Q7RTX7 472 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 THEM5Q8N1Q8 247 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 IQCA1LA6NCM1 817 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 THAP12O43422 761 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 GPC4O75487 556 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 ZNF18P17022 549 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 PDXDC2PQ6P474 469 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 ACCSQ96QU6 501 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 MMTAG2Q9BU76 263 aaKnown RBP11.51□□□□□ -0.57
TRPS1-201ENST00000220888 MYL7Q01449 175 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 TTC30BQ8N4P2 665 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 DACT3Q96B18 629 aaPredicted RBP11.51□□□□□ -0.57
TRPS1-201ENST00000220888 ABCF3Q9NUQ8 709 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 ZNF148Q9UQR1 794 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 DENND3A2RUS2 1198 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 PDE8BO95263 885 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 PPARGP37231 505 aaPredicted RBP11.51□□□□□ -0.57
TRPS1-201ENST00000220888 VPS41P49754 854 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 SYDE2Q5VT97 1194 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 KAZNQ674X7 775 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 NOSTRINQ8IVI9 506 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 SLF1Q9BQI6 1058 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 PRDM5Q9NQX1 630 aaPredicted RBP11.51□□□□□ -0.57
TRPS1-201ENST00000220888 KIAA1024Q9UPX6 916 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 ZBTB1Q9Y2K1 713 aa11.51□□□□□ -0.57
TRPS1-201ENST00000220888 NEMP1O14524 444 aa11.5□□□□□ -0.57
TRPS1-201ENST00000220888 MED7O43513 233 aa11.5□□□□□ -0.57
TRPS1-201ENST00000220888 ZBTB7AO95365 584 aa11.5□□□□□ -0.57
TRPS1-201ENST00000220888 PPP2R5EQ16537 467 aa11.5□□□□□ -0.57
TRPS1-201ENST00000220888 MAP3K21Q5TCX8 1036 aa11.5□□□□□ -0.57
TRPS1-201ENST00000220888 RNF217Q8TC41 542 aa11.5□□□□□ -0.57
TRPS1-201ENST00000220888 SMYD2Q9NRG4 433 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms