RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 NMT2O60551 498 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 ABL2P42684 1182 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 PDE4DQ08499 809 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 BLIDQ8IZY5 108 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 UHMK1Q8TAS1 419 aaKnown RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 AFAP1L1Q8TED9 768 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 MTRQ99707 1265 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 RNF26Q9BY78 433 aaPredicted RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 BLOC1S6Q9UL45 172 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 EME2A4GXA9 379 aaPredicted RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 SMCO2A6NFE2 343 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 FOXN1O15353 648 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 FAM163BP0C2L3 166 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 NONOQ15233 471 aaKnown RBP eCLIP11.7□□□□□ -0.54
VPS18-201ENST00000220509 ZYXQ15942 572 aaKnown RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 AMIGO3Q86WK7 504 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 GSPT2Q8IYD1 628 aaKnown RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 SMYD4Q8IYR2 804 aaPredicted RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 C17orf50Q8WW18 174 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
VPS18-201ENST00000220509 SLF1Q9BQI6 1058 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 LY9Q9HBG7 655 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 USP40Q9NVE5 1235 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 UBAP1Q9NZ09 502 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 TMOD4Q9NZQ9 345 aa11.7□□□□□ -0.54
VPS18-201ENST00000220509 AKR1B15C9JRZ8 316 aaPredicted RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 EBAG9O00559 213 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 MYO1BO43795 1136 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 ZRANB2O95218 330 aaKnown RBP eCLIP11.69□□□□□ -0.54
VPS18-201ENST00000220509 ARID5AQ03989 594 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 NCAPH2Q6IBW4 605 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 RBM43Q6ZSC3 357 aaKnown RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 FCHSD1Q86WN1 690 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 SLC35F6Q8N357 371 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 CEP112Q8N8E3 955 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 FUT8Q9BYC5 575 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 PHRF1Q9P1Y6 1649 aaKnown RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 USP17L3A6NCW0 530 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 USP17L4A6NCW7 530 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 SPECC1LQ69YQ0 1117 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 DYMQ7RTS9 669 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 USP17L1Q7RTZ2 530 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 TMEM110Q86TL2 294 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 FAM114A1Q8IWE2 563 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 JADE2Q9NQC1 790 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 SAMSN1Q9NSI8 373 aaKnown RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 CCDC151A5D8V7 595 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 SPDYE3A6NKU9 549 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 ENO4A6NNW6 628 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 KIF28PB7ZC32 967 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 SKAP2O75563 359 aaPredicted RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 ERLIN2O94905 339 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 CTDNEP1O95476 244 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 TUBB4AP04350 444 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 EN1Q05925 392 aaPredicted RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 CASP8Q14790 479 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 FOXP1Q9H334 677 aaPredicted RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 XDHP47989 1333 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 MARF1Q9Y4F3 1742 aaKnown RBP11.69□□□□□ -0.54
VPS18-201ENST00000220509 PLEKHG2Q9H7P9 1386 aa11.69□□□□□ -0.54
VPS18-201ENST00000220509 DYTNA2CJ06 578 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 RNF40O75150 1001 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 SLC1A4P43007 532 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 ANTXR2P58335 489 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 ZNF483Q8TF39 744 aaPredicted RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 ALDH8A1Q9H2A2 487 aaPredicted RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 PCDHGA4Q9Y5G9 962 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 TESPA1A2RU30 521 aaPredicted RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 MRPL12P52815 198 aaKnown RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 PRR5LQ6MZQ0 368 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 SRGAP1Q7Z6B7 1085 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 SAPCD2Q86UD0 394 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 CEP57Q86XR8 500 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 REXO1Q8N1G1 1221 aaKnown RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 SLC44A5Q8NCS7 719 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 MICAL1Q8TDZ2 1067 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 EPSTI1Q96J88 318 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 CPVLQ9H3G5 476 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 USO1O60763 962 aaKnown RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 PPP6R2O75170 966 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 GCFC2P16383 781 aaKnown RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 ATP2B4P23634 1241 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 GUCY1A2P33402 732 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 VSNL1P62760 191 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 PAK1Q13153 545 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 BRD3Q15059 726 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 WDR78Q5VTH9 848 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 REXO1L1PQ8IX06 675 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 OXER1Q8TDS5 423 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
VPS18-201ENST00000220509 LUC7L2Q9Y383 392 aaKnown RBP11.68□□□□□ -0.54
VPS18-201ENST00000220509 A0A0U1RQJ8 604 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 PLCD1P51178 756 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 TRIM65Q6PJ69 517 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 CSGALNACT2Q8N6G5 542 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 STAG1Q8WVM7 1258 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 ATRIPQ8WXE1 791 aa11.67□□□□□ -0.54
VPS18-201ENST00000220509 MRPL44Q9H9J2 332 aaKnown RBP11.67□□□□□ -0.54
VPS18-201ENST00000220509 LRWD1Q9UFC0 647 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms