RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 SETSIPP0DME0 302 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 PYGBP11216 843 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 KLK7P49862 253 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 MDM2Q00987 491 aaPredicted RBP16.16■□□□□ 0.18
PTPRA-201ENST00000216877 CORO1CQ9ULV4 474 aaPredicted RBP16.16■□□□□ 0.18
PTPRA-201ENST00000216877 GOLGA6L10A0A0M3HER8 536 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 RASSF10A6NK89 507 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 ZBTB43O43298 467 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 FTCDO95954 541 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 PLEKP08567 350 aaPredicted RBP16.16■□□□□ 0.18
PTPRA-201ENST00000216877 TCP1P17987 556 aaKnown RBP16.16■□□□□ 0.18
PTPRA-201ENST00000216877 NOSTRINQ8IVI9 506 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 LGR6Q9HBX8 967 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 FERP16591 822 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 PPP2R2AP63151 447 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 TCP11X2Q5H9J9 407 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 RUFY4Q6ZNE9 571 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 FAM47EQ6ZV65 393 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 ARHGAP22Q7Z5H3 698 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 KIAA0825Q8IV33 1275 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 IQCKQ8N0W5 287 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 FNBP4Q8N3X1 1017 aaPredicted RBP16.16■□□□□ 0.18
PTPRA-201ENST00000216877 MYD88Q99836 296 aa16.16■□□□□ 0.18
PTPRA-201ENST00000216877 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 LUC7L3O95232 432 aaKnown RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 LINGO3P0C6S8 592 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 MAGEA1P43355 309 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 SLC39A6Q13433 755 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 CUL3Q13618 768 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 DBN1Q16643 649 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 ANKRD20A2Q5SQ80 823 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 ANKRD20A1Q5TYW2 823 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 ANKRD20A3Q5VUR7 823 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 CWF19L1Q69YN2 538 aaKnown RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 TAF1DQ9H5J8 278 aaPredicted RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 C2CD2Q9Y426 696 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 PCDHGC5Q9Y5F6 944 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 OVOS2A0A0J9YW53 1432 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 OVOS2Q6IE36 1432 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 IGF2BP3O00425 579 aaKnown RBP eCLIP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 DDX58O95786 925 aaKnown RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 ARID5AQ03989 594 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 APTXQ7Z2E3 356 aaKnown RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 TMC4Q7Z404 712 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 MAGEC3Q8TD91 643 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 MMRN2Q9H8L6 949 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 HPS5Q9UPZ3 1129 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 GDAQ9Y2T3 454 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 ARHGEF10O15013 1369 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 TRAPPC3O43617 180 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 PARP1P09874 1014 aaKnown RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 ATP2A2P16615 1042 aaKnown RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 TPP2P29144 1249 aaPredicted RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 DPYDQ12882 1025 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 ZNF174Q15697 407 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 UBE3BQ7Z3V4 1068 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 PAGE5Q96GU1 130 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 FAM207AQ9NSI2 230 aaPredicted RBP16.15■□□□□ 0.18
PTPRA-201ENST00000216877 LMCD1Q9NZU5 365 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 USH1CQ9Y6N9 552 aa16.15■□□□□ 0.18
PTPRA-201ENST00000216877 SPDYE5A6NIY4 337 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 B4E1Z4 1266 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 STXBP3O00186 592 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 RASSF7Q02833 373 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 KSR2Q6VAB6 950 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 MAP3K14Q99558 947 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 AATFQ9NY61 560 aaKnown RBP eCLIP16.14■□□□□ 0.17
PTPRA-201ENST00000216877 DLGAP2Q9P1A6 1054 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 ATP5J2-PTCD1G3V325 749 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 AHCYL1O43865 530 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 FGAP02671 866 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 DRAXINQ8NBI3 349 aaPredicted RBP16.14■□□□□ 0.17
PTPRA-201ENST00000216877 CHMP6Q96FZ7 201 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 NFAT5O94916 1531 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 ANO9A1A5B4 782 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 PRAMEF22A3QJZ6 481 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 DCDC2CA8MYV0 355 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 ALDH5A1P51649 535 aaPredicted RBP16.14■□□□□ 0.17
PTPRA-201ENST00000216877 PPP1R15BQ5SWA1 713 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 SPATA21Q7Z572 469 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 FBF1Q8TES7 1133 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 CASKIN2Q8WXE0 1202 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 TAF4BQ92750 862 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 ACSBG1Q96GR2 724 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 DSCC1Q9BVC3 393 aa16.14■□□□□ 0.17
PTPRA-201ENST00000216877 PBX1P40424 430 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 EHHADHQ08426 723 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 TMEM67Q5HYA8 995 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 EPHA10Q5JZY3 1008 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 TMEM154Q6P9G4 183 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 MYLK4Q86YV6 388 aaPredicted RBP16.13■□□□□ 0.17
PTPRA-201ENST00000216877 CCHCR1Q8TD31 782 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 SYMPKQ92797 1274 aaKnown RBP16.13■□□□□ 0.17
PTPRA-201ENST00000216877 NAF1Q96HR8 494 aaKnown RBP16.13■□□□□ 0.17
PTPRA-201ENST00000216877 DPH5Q9H2P9 285 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 ECT2Q9H8V3 914 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 ARHGEF10LQ9HCE6 1279 aa16.13■□□□□ 0.17
PTPRA-201ENST00000216877 PRR36Q9H6K5 1346 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms