RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 A0A087WWV3 80 aa15.2■□□□□ 0.02
SIX4-201ENST00000216513 YWHAEP62258 255 aaKnown RBP15.2■□□□□ 0.02
SIX4-201ENST00000216513 PPP2R5DQ14738 602 aa15.2■□□□□ 0.02
SIX4-201ENST00000216513 CCDC25Q86WR0 208 aa15.2■□□□□ 0.02
SIX4-201ENST00000216513 PI4K2BQ8TCG2 481 aa15.2■□□□□ 0.02
SIX4-201ENST00000216513 ISCA1Q9BUE6 129 aa15.2■□□□□ 0.02
SIX4-201ENST00000216513 NDC80O14777 642 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 GANCQ8TET4 914 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 LEO1Q8WVC0 666 aaPredicted RBP15.19■□□□□ 0.02
SIX4-201ENST00000216513 FAM84BQ96KN1 310 aaPredicted RBP15.19■□□□□ 0.02
SIX4-201ENST00000216513 STIM2Q9P246 746 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 NOLC1Q14978 699 aaKnown RBP eCLIP15.19■□□□□ 0.02
SIX4-201ENST00000216513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.19■□□□□ 0.02
SIX4-201ENST00000216513 FSD2A1L4K1 749 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 C1orf228Q6PIY5 440 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 POTEAQ6S8J7 498 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 OR6J1Q8NGC5 347 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 CCDC42Q96M95 316 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 PRPHP41219 470 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 RSRC2Q7L4I2 434 aaKnown RBP15.19■□□□□ 0.02
SIX4-201ENST00000216513 IPO4Q8TEX9 1081 aaKnown RBP15.19■□□□□ 0.02
SIX4-201ENST00000216513 KIAA1024Q9UPX6 916 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 ADAMTS13Q76LX8 1427 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 E7EVH7 732 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 MEIS1O00470 390 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 TWF2Q6IBS0 349 aaKnown RBP15.19■□□□□ 0.02
SIX4-201ENST00000216513 OSBP2Q969R2 916 aa15.19■□□□□ 0.02
SIX4-201ENST00000216513 TNNC1P63316 161 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 TRMT44Q8IYL2 757 aaKnown RBP15.18■□□□□ 0.02
SIX4-201ENST00000216513 DCAF4Q8WV16 495 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 SPATA33Q96N06 139 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 RBSNQ9H1K0 784 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 KMT5AQ9NQR1 393 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 FAM160A1Q05DH4 1040 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 CCDC155Q8N6L0 562 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 SMC1BQ8NDV3 1235 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 NAA15Q9BXJ9 866 aaKnown RBP15.18■□□□□ 0.02
SIX4-201ENST00000216513 ACAD9Q9H845 621 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 LARSQ9P2J5 1176 aaKnown RBP15.18■□□□□ 0.02
SIX4-201ENST00000216513 CPS1P31327 1500 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 PPRC1Q5VV67 1664 aaKnown RBP15.18■□□□□ 0.02
SIX4-201ENST00000216513 ZNF280CQ8ND82 737 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 PPP1R14CQ8TAE6 165 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 HESX1Q9UBX0 185 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 PTPRUQ92729 1446 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 CYP2E1P05181 493 aaPredicted RBP15.18■□□□□ 0.02
SIX4-201ENST00000216513 SNX25Q9H3E2 840 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 PANK4Q9NVE7 773 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 PKP1Q13835 747 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 ZNF569Q5MCW4 686 aa15.18■□□□□ 0.02
SIX4-201ENST00000216513 GTF2A2P52657 109 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 ELMOD1Q8N336 334 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 ZNF668Q96K58 619 aaPredicted RBP15.17■□□□□ 0.02
SIX4-201ENST00000216513 C4orf50Q6ZRC1 276 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 FAM169AQ9Y6X4 670 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 DPYSL4O14531 572 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 DSTYKQ6XUX3 929 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 SND1Q7KZF4 910 aaKnown RBP eCLIP15.17■□□□□ 0.02
SIX4-201ENST00000216513 RYBPQ8N488 228 aaPredicted RBP15.17■□□□□ 0.02
SIX4-201ENST00000216513 NUDT12Q9BQG2 462 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 SPDYE16A6NNV3 312 aaPredicted RBP15.17■□□□□ 0.02
SIX4-201ENST00000216513 SPDYE2Q495Y8 402 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 TSC1Q92574 1164 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 USP31Q70CQ4 1352 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 DYNC1LI2O43237 492 aaPredicted RBP15.17■□□□□ 0.02
SIX4-201ENST00000216513 CUTAO60888 179 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 GALNT17Q6IS24 598 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 SCYL2Q6P3W7 929 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 NSUN6Q8TEA1 469 aaKnown RBP15.17■□□□□ 0.02
SIX4-201ENST00000216513 LMBR1Q8WVP7 490 aa15.17■□□□□ 0.02
SIX4-201ENST00000216513 UTYO14607 1347 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 ABCB11O95342 1321 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 TYW5A2RUC4 315 aaKnown RBP15.16■□□□□ 0.02
SIX4-201ENST00000216513 SPOPO43791 374 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 CCDC84Q86UT8 332 aaPredicted RBP15.16■□□□□ 0.02
SIX4-201ENST00000216513 DISC1Q9NRI5 854 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 RARBP10826 455 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 GSDMBQ8TAX9 411 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 URGCPQ8TCY9 931 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 WDR11Q9BZH6 1224 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 HERC5Q9UII4 1024 aaKnown RBP15.16■□□□□ 0.02
SIX4-201ENST00000216513 CROCC2H7BZ55 1655 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 CD163L1Q9NR16 1453 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 PNMA6FA0A0J9YX94 578 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 ASB14A6NK59 587 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 PIK3CAP42336 1068 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 ITKQ08881 620 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 RBM46Q8TBY0 533 aaKnown RBP15.16■□□□□ 0.02
SIX4-201ENST00000216513 TBCKQ8TEA7 893 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 PPM1EQ8WY54 764 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 SELENOOQ9BVL4 669 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 CPVLQ9H3G5 476 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 TXNDC16Q9P2K2 825 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 SHTN1A0MZ66 631 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 PPP1R2P41236 205 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 MTMR1Q13613 665 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 ZNF589Q86UQ0 364 aaPredicted RBP15.16■□□□□ 0.02
SIX4-201ENST00000216513 ANKRD13CQ8N6S4 541 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 ANKRD36BP1Q96IX9 119 aa15.16■□□□□ 0.02
SIX4-201ENST00000216513 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms