RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 USP38Q8NB14 1042 aa23.19■■□□□ 1.3
SYNGR1-201ENST00000216155 ADD3Q9UEY8 706 aaKnown RBP23.19■■□□□ 1.3
SYNGR1-201ENST00000216155 GBF1Q92538 1859 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 CCDC171Q6TFL3 1326 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 CHD9Q3L8U1 2897 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 DUSP28Q4G0W2 176 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 TBC1D10CQ8IV04 446 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 CLEC4DQ8WXI8 215 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 HERVK_113Q902F9 699 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 NOC4LQ9BVI4 516 aaKnown RBP23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 TRPV6Q9H1D0 765 aa23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 CXXC1Q9P0U4 656 aaPredicted RBP23.18■■□□□ 1.3
SYNGR1-201ENST00000216155 PTPDC1A2A3K4 754 aa23.17■■□□□ 1.3
SYNGR1-201ENST00000216155 TICAM2Q86XR7 235 aa23.17■■□□□ 1.3
SYNGR1-201ENST00000216155 SEZ6LQ9BYH1 1024 aa23.17■■□□□ 1.3
SYNGR1-201ENST00000216155 LNPKQ9C0E8 428 aa23.17■■□□□ 1.3
SYNGR1-201ENST00000216155 WNT8AQ9H1J5 351 aa23.17■■□□□ 1.3
SYNGR1-201ENST00000216155 LAMA4Q16363 1823 aa23.17■■□□□ 1.3
SYNGR1-201ENST00000216155 LOC102724159A0A0B4J2E5 919 aa23.16■■□□□ 1.3
SYNGR1-201ENST00000216155 SNHG28P0DPA3 235 aa23.16■■□□□ 1.3
SYNGR1-201ENST00000216155 CCL23P55773 120 aa23.16■■□□□ 1.3
SYNGR1-201ENST00000216155 ZNF543Q08ER8 600 aa23.16■■□□□ 1.3
SYNGR1-201ENST00000216155 PWP2Q15269 919 aaKnown RBP23.16■■□□□ 1.3
SYNGR1-201ENST00000216155 WDR11Q9BZH6 1224 aa23.16■■□□□ 1.3
SYNGR1-201ENST00000216155 WDR19Q8NEZ3 1342 aa23.15■■□□□ 1.3
SYNGR1-201ENST00000216155 PCP11498 1178 aaKnown RBP23.15■■□□□ 1.3
SYNGR1-201ENST00000216155 CALML3P27482 149 aa23.15■■□□□ 1.3
SYNGR1-201ENST00000216155 AKNAD1Q5T1N1 836 aa23.15■■□□□ 1.3
SYNGR1-201ENST00000216155 ALDH8A1Q9H2A2 487 aaPredicted RBP23.15■■□□□ 1.3
SYNGR1-201ENST00000216155 CHD7Q9P2D1 2997 aa23.14■■□□□ 1.3
SYNGR1-201ENST00000216155 NEDD4P46934 1319 aa23.14■■□□□ 1.3
SYNGR1-201ENST00000216155 RBM47A0AV96 593 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 TRIM6-TRIM34B2RNG4 842 aa23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 RPS6P62753 249 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 RNF207Q6ZRF8 634 aa23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 MFSD6Q6ZSS7 791 aa23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 OTOP2Q7RTS6 562 aa23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 TTC14Q96N46 770 aa23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 MTIF3Q9H2K0 278 aaKnown RBP23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 SCN10AQ9Y5Y9 1956 aa23.14■■□□□ 1.29
SYNGR1-201ENST00000216155 FGBP02675 491 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 EDNRBP24530 442 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 PURAQ00577 322 aaKnown RBP23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 RAB30Q15771 203 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 RILPL2Q969X0 211 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 VWCEQ96DN2 955 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 PRDM12Q9H4Q4 367 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 TRMT13Q9NUP7 481 aaKnown RBP23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 POLR3EQ9NVU0 708 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 PNMA2Q9UL42 364 aa23.13■■□□□ 1.29
SYNGR1-201ENST00000216155 CPT1AP50416 773 aa23.12■■□□□ 1.29
SYNGR1-201ENST00000216155 OR6J1Q8NGC5 347 aa23.12■■□□□ 1.29
SYNGR1-201ENST00000216155 SCLYQ96I15 445 aa23.12■■□□□ 1.29
SYNGR1-201ENST00000216155 GAS2L1Q99501 681 aaPredicted RBP23.12■■□□□ 1.29
SYNGR1-201ENST00000216155 RNF41Q9H4P4 317 aaPredicted RBP23.12■■□□□ 1.29
SYNGR1-201ENST00000216155 TTC28Q96AY4 2481 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 MYO9BQ13459 2157 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 MYL3P08590 195 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 PPP2R5BQ15173 497 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 SMC5Q8IY18 1101 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 ZKSCAN3Q9BRR0 538 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 NKX2-4Q9H2Z4 354 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 MSRAQ9UJ68 235 aa23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 YBX2Q9Y2T7 364 aaKnown RBP23.11■■□□□ 1.29
SYNGR1-201ENST00000216155 TNKSO95271 1327 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 GOLGA8HP0CJ92 632 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 CYP2C9P11712 490 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 SDSP20132 328 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 PDE4DQ08499 809 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 ADGRE1Q14246 886 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 GPATCH4Q5T3I0 446 aaKnown RBP23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 DNERQ8NFT8 737 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 ESR2Q92731 530 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 MTG1Q9BT17 334 aaPredicted RBP23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 CPVLQ9H3G5 476 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 PRDM6Q9NQX0 595 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 TANC1Q9C0D5 1861 aa23.1■■□□□ 1.29
SYNGR1-201ENST00000216155 MFAP1P55081 439 aaKnown RBP23.09■■□□□ 1.29
SYNGR1-201ENST00000216155 USH1GQ495M9 461 aa23.09■■□□□ 1.29
SYNGR1-201ENST00000216155 COPS5Q92905 334 aa23.09■■□□□ 1.29
SYNGR1-201ENST00000216155 SCN5AQ14524 2016 aa23.09■■□□□ 1.29
SYNGR1-201ENST00000216155 NKRFO15226 690 aaKnown RBP eCLIP23.08■■□□□ 1.29
SYNGR1-201ENST00000216155 SUPT20HL2P0C7V6 817 aa23.08■■□□□ 1.29
SYNGR1-201ENST00000216155 B4GALNT3Q6L9W6 998 aa23.08■■□□□ 1.29
SYNGR1-201ENST00000216155 RPUSD2Q8IZ73 545 aaKnown RBP23.08■■□□□ 1.29
SYNGR1-201ENST00000216155 SCFD2Q8WU76 684 aa23.08■■□□□ 1.29
SYNGR1-201ENST00000216155 SYMPKQ92797 1274 aaKnown RBP23.08■■□□□ 1.29
SYNGR1-201ENST00000216155 MPHOSPH6Q99547 160 aaKnown RBP23.08■■□□□ 1.29
SYNGR1-201ENST00000216155 RAD50Q92878 1312 aa23.08■■□□□ 1.28
SYNGR1-201ENST00000216155 ZNF213O14771 459 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 ARIH2O95376 493 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 RABGGTBP53611 331 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 CDC37Q16543 378 aaPredicted RBP23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 TJAP1Q5JTD0 557 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 DGKHQ86XP1 1220 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 PLEKHM2Q8IWE5 1019 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 PPP1R13LQ8WUF5 828 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 PPM1EQ8WY54 764 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 UBA5Q9GZZ9 404 aa23.07■■□□□ 1.28
SYNGR1-201ENST00000216155 SLC28A3Q9HAS3 691 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms