RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 USP17L20D6RJB6 530 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 GH2P01242 217 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 HOXC6P09630 235 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 CYP2C19P33261 490 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 USP17L24Q0WX57 530 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 GRB14Q14449 540 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 CAVIN1Q6NZI2 390 aaKnown RBP14.04□□□□□ -0.16
SNU13-201ENST00000215956 TMTC3Q6ZXV5 915 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 MYLIPQ8WY64 445 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 BRMS1Q9HCU9 246 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 PRDM5Q9NQX1 630 aaPredicted RBP14.04□□□□□ -0.16
SNU13-201ENST00000215956 TOP1P11387 765 aaKnown RBP14.04□□□□□ -0.16
SNU13-201ENST00000215956 CYBAP13498 195 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 FOSBP53539 338 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 SMAD3P84022 425 aaKnown RBP14.04□□□□□ -0.16
SNU13-201ENST00000215956 GABPAQ06546 454 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 GJC2Q5T442 439 aaPredicted RBP14.04□□□□□ -0.16
SNU13-201ENST00000215956 KRT40Q6A162 431 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 PNMA1Q8ND90 353 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 TRPV1Q8NER1 839 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 GPT2Q8TD30 523 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 PHKBQ93100 1093 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 TTYH1Q9H313 450 aaPredicted RBP14.04□□□□□ -0.16
SNU13-201ENST00000215956 GDPD2Q9HCC8 539 aa14.04□□□□□ -0.16
SNU13-201ENST00000215956 BAZ2AQ9UIF9 1905 aaKnown RBP14.04□□□□□ -0.16
SNU13-201ENST00000215956 SMIM22K7EJ46 135 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 FOSL2P15408 326 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 ZNF445P59923 1031 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 GUCY1B3Q02153 619 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 CCDC183Q5T5S1 534 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 LBX2Q6XYB7 198 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 SLC39A5Q6ZMH5 540 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 CATSPERGQ6ZRH7 1159 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 LEO1Q8WVC0 666 aaPredicted RBP14.03□□□□□ -0.16
SNU13-201ENST00000215956 BADQ92934 168 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 BTBD7Q9P203 1132 aa14.03□□□□□ -0.16
SNU13-201ENST00000215956 KBTBD13C9JR72 458 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 YEATS4O95619 227 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 IGHA2P01877 340 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 VCAM1P19320 739 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 SMARCA1P28370 1054 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 USP14P54578 494 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 GRM4Q14833 912 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 TRIM60Q495X7 471 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 ARRDC4Q8NCT1 418 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 KCNG4Q8TDN1 519 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 SYMPKQ92797 1274 aaKnown RBP14.02□□□□□ -0.16
SNU13-201ENST00000215956 FOXP1Q9H334 677 aaPredicted RBP14.02□□□□□ -0.16
SNU13-201ENST00000215956 RTEL1Q9NZ71 1219 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 RCOR1Q9UKL0 485 aa14.02□□□□□ -0.16
SNU13-201ENST00000215956 SMCHD1A6NHR9 2005 aa14.02□□□□□ -0.17
SNU13-201ENST00000215956 DTNBO60941 627 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 NOVP48745 357 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 SNX17Q15036 470 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 MYSM1Q5VVJ2 828 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 RCSD1Q6JBY9 416 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 SLC44A5Q8NCS7 719 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 CHAMP1Q96JM3 812 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 KIAA1683Q9H0B3 1180 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 PDLIM7Q9NR12 457 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 IL17RBQ9NRM6 502 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 POLR3EQ9NVU0 708 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 STX8Q9UNK0 236 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 A0A0G2JMZ2 1700 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 SPDYE16A6NNV3 312 aaPredicted RBP14.01□□□□□ -0.17
SNU13-201ENST00000215956 NMT2O60551 498 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 MMP1P03956 469 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 U2AF2P26368 475 aaKnown RBP eCLIP14.01□□□□□ -0.17
SNU13-201ENST00000215956 MRE11P49959 708 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 EVX2Q03828 476 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 MYO9BQ13459 2157 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 ZSCAN23Q3MJ62 389 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 ANO1Q5XXA6 986 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 TATDN1Q6P1N9 297 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 TMEM47Q9BQJ4 181 aa14.01□□□□□ -0.17
SNU13-201ENST00000215956 ZNFX1Q9P2E3 1918 aaKnown RBP14.01□□□□□ -0.17
SNU13-201ENST00000215956 TFIP11Q9UBB9 837 aaKnown RBP14.01□□□□□ -0.17
SNU13-201ENST00000215956 MYCNP04198 464 aaPredicted RBP14□□□□□ -0.17
SNU13-201ENST00000215956 SF3A1Q15459 793 aaKnown RBP14□□□□□ -0.17
SNU13-201ENST00000215956 OLFML2BQ68BL8 750 aa14□□□□□ -0.17
SNU13-201ENST00000215956 DPP9Q86TI2 863 aa14□□□□□ -0.17
SNU13-201ENST00000215956 BICD2Q8TD16 824 aa14□□□□□ -0.17
SNU13-201ENST00000215956 ACER1Q8TDN7 264 aa14□□□□□ -0.17
SNU13-201ENST00000215956 RPAP3Q9H6T3 665 aaPredicted RBP14□□□□□ -0.17
SNU13-201ENST00000215956 SH3GLB2Q9NR46 395 aa14□□□□□ -0.17
SNU13-201ENST00000215956 DDX19AQ9NUU7 478 aaKnown RBP14□□□□□ -0.17
SNU13-201ENST00000215956 CNTNAP5Q8WYK1 1306 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 TMEM265A0A087WTH1 108 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 FSD2A1L4K1 749 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 TRIM43BA6NCK2 446 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 SEPT4O43236 478 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 PPFIA3O75145 1194 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 GADD45BO75293 160 aaPredicted RBP13.99□□□□□ -0.17
SNU13-201ENST00000215956 TTLL1O95922 423 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 PARP1P09874 1014 aaKnown RBP13.99□□□□□ -0.17
SNU13-201ENST00000215956 CALML3P27482 149 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 ADORA2AP29274 412 aa13.99□□□□□ -0.17
SNU13-201ENST00000215956 NASPP49321 788 aaPredicted RBP13.99□□□□□ -0.17
SNU13-201ENST00000215956 FUT2Q10981 343 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms