RNA–Protein interactions for RNA: ENST00000164640.8

PDZD4-201, Transcript of PDZ domain containing 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDZD4, Length 3,689 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-201ENST00000164640 STK36Q9NRP7 1315 aa16.65■□□□□ 0.26
PDZD4-201ENST00000164640 PTPRUQ92729 1446 aa16.65■□□□□ 0.26
PDZD4-201ENST00000164640 PXDNQ92626 1479 aa16.65■□□□□ 0.26
PDZD4-201ENST00000164640 HMGB1P1B2RPK0 211 aaPredicted RBP16.65■□□□□ 0.26
PDZD4-201ENST00000164640 FUKQ8N0W3 1084 aa16.65■□□□□ 0.26
PDZD4-201ENST00000164640 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
PDZD4-201ENST00000164640 AP1M1Q9BXS5 423 aa16.65■□□□□ 0.26
PDZD4-201ENST00000164640 DPH5Q9H2P9 285 aa16.65■□□□□ 0.26
PDZD4-201ENST00000164640 SLC39A2Q9NP94 309 aa16.65■□□□□ 0.26
PDZD4-201ENST00000164640 DDR1Q08345 913 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 IFNAR2P48551 515 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 CCDC63Q8NA47 563 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 SEC16BQ96JE7 1060 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 SH2D4AQ9H788 454 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 NEO1Q92859 1461 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 LRRC10BA6NIK2 292 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 CTNND1O60716 968 aaKnown RBP16.64■□□□□ 0.25
PDZD4-201ENST00000164640 MAP2K1Q02750 393 aaPredicted RBP16.64■□□□□ 0.25
PDZD4-201ENST00000164640 STAG1Q8WVM7 1258 aa16.64■□□□□ 0.25
PDZD4-201ENST00000164640 CRYBG1Q9Y4K1 1723 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 BICDL2A1A5D9 508 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 PPP1R12AO14974 1030 aaPredicted RBP16.63■□□□□ 0.25
PDZD4-201ENST00000164640 PALMO75781 387 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 PHKG2P15735 406 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 MAGOHP61326 146 aaKnown RBP16.63■□□□□ 0.25
PDZD4-201ENST00000164640 KIF6Q6ZMV9 814 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 RUFY4Q6ZNE9 571 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 MAGOHBQ96A72 148 aaKnown RBP16.63■□□□□ 0.25
PDZD4-201ENST00000164640 CDK5RAP3Q96JB5 506 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 CIAO1O76071 339 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 SLC1A4P43007 532 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 RAPGEF1Q13905 1077 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 ZHX3Q9H4I2 956 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 TCP11L1Q9NUJ3 509 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 LRRC53A6NM62 1247 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 MARCH6O60337 910 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 CYP7A1P22680 504 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 UBE3CQ15386 1083 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 DYMQ7RTS9 669 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 LCORLQ8N3X6 602 aa16.63■□□□□ 0.25
PDZD4-201ENST00000164640 RNF26Q9BY78 433 aaPredicted RBP16.63■□□□□ 0.25
PDZD4-201ENST00000164640 CYP2D7A0A087X1C5 515 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 A0A1W2PQC6 194 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 ADAT2Q7Z6V5 191 aaKnown RBP16.62■□□□□ 0.25
PDZD4-201ENST00000164640 ADSSL1Q8N142 457 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 MDM1Q8TC05 714 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 CASKIN2Q8WXE0 1202 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 GPKOWQ92917 476 aaPredicted RBP eCLIP16.62■□□□□ 0.25
PDZD4-201ENST00000164640 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
PDZD4-201ENST00000164640 L3MBTL1Q9Y468 752 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 CD2APQ9Y5K6 639 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 SRGNP10124 158 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 TRIM68Q6AZZ1 485 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 SH3RF1Q7Z6J0 888 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 NSMCE1Q8WV22 266 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 LRRC45Q96CN5 670 aa16.62■□□□□ 0.25
PDZD4-201ENST00000164640 NBPF26B4DH59 902 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 SCTRP47872 440 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 CASP7P55210 303 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 KIAA0753Q2KHM9 967 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 NBPF10Q6P3W6 841 aaKnown RBP16.61■□□□□ 0.25
PDZD4-201ENST00000164640 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 NBPF15Q8N660 670 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 FAM167BQ9BTA0 163 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 YIPF3Q9GZM5 350 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 GOLPH3Q9H4A6 298 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 THAP9Q9H5L6 903 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 GREM2Q9H772 168 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 KIF9Q9HAQ2 790 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 SPATS2LQ9NUQ6 558 aaKnown RBP16.61■□□□□ 0.25
PDZD4-201ENST00000164640 SAMD15Q9P1V8 674 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 SOS2Q07890 1332 aaPredicted RBP16.61■□□□□ 0.25
PDZD4-201ENST00000164640 DNM1LO00429 736 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 QPCTQ16769 361 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 STAMBPL1Q96FJ0 436 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 TRMT112Q9UI30 125 aaKnown RBP16.61■□□□□ 0.25
PDZD4-201ENST00000164640 CRYMQ14894 314 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 ACCSLQ4AC99 568 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 ANKRD40Q6AI12 368 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 P2RX5Q93086 422 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 KCNG1Q9UIX4 513 aa16.61■□□□□ 0.25
PDZD4-201ENST00000164640 ZNF263O14978 683 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 EPB41P11171 864 aaKnown RBP16.6■□□□□ 0.25
PDZD4-201ENST00000164640 FCER1AP12319 257 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 AP1ARQ63HQ0 302 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.6■□□□□ 0.25
PDZD4-201ENST00000164640 MTRQ99707 1265 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 ARHGAP20Q9P2F6 1191 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 RGPD1P0DJD0 1748 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 RAD51CO43502 376 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 NOD2Q9HC29 1040 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 ATP8A1Q9Y2Q0 1164 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 MYBL1P10243 752 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 SPATA5Q8NB90 893 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 RETREG2Q8NC44 543 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 CCDC197Q8NCU1 140 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 MGARPQ8TDB4 240 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 WHAMMQ8TF30 809 aa16.6■□□□□ 0.25
PDZD4-201ENST00000164640 MTMR8Q96EF0 704 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms