RNA–Protein interactions for RNA: ENST00000161559.10

CEACAM1-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CEACAM1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-201ENST00000161559 PCDH11XQ9BZA7 1347 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PCDH11YQ9BZA8 1340 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 NID2Q14112 1375 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PRPF3O43395 683 aaKnown RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 CPP00450 1065 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 SRGNP10124 158 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PLCG1P19174 1290 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 INPP5BP32019 993 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 MTIF2P46199 727 aaKnown RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 GUCY2DQ02846 1103 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 NNTQ13423 1086 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 DYMQ7RTS9 669 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 MSL3Q8N5Y2 521 aaKnown RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 KIAA0895Q8NCT3 520 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 CTCFLQ8NI51 663 aaPredicted RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 ESR2Q92731 530 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 DYNLL2Q96FJ2 89 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 RIOK1Q9BRS2 568 aaKnown RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PLA2G12BQ9BX93 195 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 TLR10Q9BXR5 811 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 SEMA6BQ9H3T3 888 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 DEF6Q9H4E7 631 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 TMOD3Q9NYL9 352 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PCDHA13Q9Y5I0 950 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 DUOX1Q9NRD9 1551 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 CCDC196A0A1B0GTZ2 297 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 FRMD3A2A2Y4 597 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 TMOD1P28289 359 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 FNTAP49354 379 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 KIF11P52732 1056 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 KCNQ4P56696 695 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PPFIA1Q13136 1202 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 QPCTQ16769 361 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 TXNRD1Q16881 649 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 FAM98CQ17RN3 349 aaKnown RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 MCTP2Q6DN12 878 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 RRAGAQ7L523 313 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 CATIPQ7Z7H3 387 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 SLC44A5Q8NCS7 719 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 CCDC42Q96M95 316 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 PURBQ96QR8 312 aaKnown RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 NCAPGQ9BPX3 1015 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 NOC4LQ9BVI4 516 aaKnown RBP6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 FGFBP2Q9BYJ0 223 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 NACAP1Q9BZK3 213 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 SH2D4AQ9H788 454 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 MMRN2Q9H8L6 949 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 EPB41L5Q9HCM4 733 aa6.49□□□□□ -1.37
CEACAM1-201ENST00000161559 NUP98P52948 1817 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 SHANK3Q9BYB0 1731 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 DCCP43146 1447 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 MAGEB6P1A0A0J9YX57 407 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 TARSL2A2RTX5 802 aaKnown RBP6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 USP17L3A6NCW0 530 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 USP17L4A6NCW7 530 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 OPLAHO14841 1288 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 SCG2P13521 617 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 RXRBP28702 533 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 FLT3P36888 993 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 NAP1L1P55209 391 aaKnown RBP6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 PDE4DQ08499 809 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 KIF5AQ12840 1032 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 NBPF9Q3BBW0 867 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 RNF187Q5TA31 235 aaPredicted RBP6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 USP17L1Q7RTZ2 530 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 ACBD3Q9H3P7 528 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 PPANQ9NQ55 473 aaKnown RBP6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 SPATA31A6Q5VVP1 1343 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 H7C1D1 291 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 CYTH3O43739 400 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 PDHBP11177 359 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 SLC5A1P13866 664 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 LSP1P33241 339 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 VAV2P52735 878 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 CHRNDQ07001 517 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 IFT88Q13099 833 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 UBAP2Q5T6F2 1119 aaKnown RBP6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 NAA35Q5VZE5 725 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 KLHL7Q8IXQ5 586 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 ZNF512BQ96KM6 892 aaPredicted RBP6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 KRT12Q99456 494 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 STIM2Q9P246 746 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 MYH1P12882 1939 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 NHSL1Q5SYE7 1610 aa6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 ZNF142P52746 1687 aaPredicted RBP6.48□□□□□ -1.37
CEACAM1-201ENST00000161559 PDE8AO60658 829 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 USP17L8P0C7I0 530 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 TECP42680 631 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 ASIC1P78348 528 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 TRIM28Q13263 835 aaKnown RBP6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 TSR1Q2NL82 804 aaKnown RBP6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 KLHDC7AQ5VTJ3 777 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 RCSD1Q6JBY9 416 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 GIMAP8Q8ND71 665 aaPredicted RBP6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 ANKRD20A12PQ8NF67 263 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 CASKIN2Q8WXE0 1202 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 NEUROG2Q9H2A3 272 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 GEMIN8Q9NWZ8 242 aaKnown RBP6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 TBC1D7Q9P0N9 293 aa6.47□□□□□ -1.37
CEACAM1-201ENST00000161559 FLT1P17948 1338 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms