RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 SEPT12Q8IYM1 358 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 PCIF1Q9H4Z3 704 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 CRCPO75575 148 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 MMP1P03956 469 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 PRDX5P30044 214 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 NECTIN1Q15223 517 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 TSPOAP1O95153 1857 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 TMEM191BP0C7N4 346 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 HOXA13P31271 388 aaPredicted RBP20.68■□□□□ 0.9
MBD3-201ENST00000156825 ASPRV1Q53RT3 343 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 HHATQ5VTY9 493 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 POLR3EQ9NVU0 708 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 ARAP3Q8WWN8 1544 aa20.68■□□□□ 0.9
MBD3-201ENST00000156825 PLEKHA8P1O95397 391 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 MMP10P09238 476 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 MKRN3Q13064 507 aaKnown RBP20.67■□□□□ 0.9
MBD3-201ENST00000156825 CUL4AQ13619 759 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 STIM2Q9P246 746 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 PALLDQ8WX93 1383 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 H2AFZP0C0S5 128 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 PCP11498 1178 aaKnown RBP20.67■□□□□ 0.9
MBD3-201ENST00000156825 KAZNQ674X7 775 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 H2AFVQ71UI9 128 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 PRDM15P57071 1507 aaPredicted RBP20.67■□□□□ 0.9
MBD3-201ENST00000156825 H7C1W4 665 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 NKX1-1Q15270 411 aaPredicted RBP20.67■□□□□ 0.9
MBD3-201ENST00000156825 LRRN2O75325 713 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 RUFY4Q6ZNE9 571 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 MED10Q9BTT4 135 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 KANSL2Q9H9L4 492 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 SAMSN1Q9NSI8 373 aaKnown RBP20.67■□□□□ 0.9
MBD3-201ENST00000156825 TTC37Q6PGP7 1564 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 ERVV-1B6SEH8 477 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 SH3BP5O60239 455 aa20.67■□□□□ 0.9
MBD3-201ENST00000156825 FAM196BA6NMK8 535 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 FOSP01100 380 aaPredicted RBP20.66■□□□□ 0.9
MBD3-201ENST00000156825 TSKSQ9UJT2 592 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 BMP3P12645 472 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 IFNAR1P17181 557 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 SMIM5Q71RC9 77 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 GSDMAQ96QA5 445 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 TMOD1P28289 359 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 ZNF131P52739 623 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 ZNF526Q8TF50 670 aaPredicted RBP20.66■□□□□ 0.9
MBD3-201ENST00000156825 RIOK1Q9BRS2 568 aaKnown RBP20.66■□□□□ 0.9
MBD3-201ENST00000156825 PFDN4Q9NQP4 134 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 CCDC125Q86Z20 511 aa20.66■□□□□ 0.9
MBD3-201ENST00000156825 PPP6R2O75170 966 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 VSIG1Q86XK7 387 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 PPP1R16BQ96T49 567 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 ADPGKQ9BRR6 497 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 ATG3Q9NT62 314 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 HYOU1Q9Y4L1 999 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 UBN2Q6ZU65 1347 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 CTNNA1P35221 906 aaKnown RBP20.65■□□□□ 0.9
MBD3-201ENST00000156825 PDE6CP51160 858 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 PSMD6Q15008 389 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 CCT6BQ92526 530 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 BEGAINQ9BUH8 593 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 SPC25Q9HBM1 224 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 TNNC2P02585 160 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 P4HA1P13674 534 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 DENND2CQ68D51 928 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 CAPN9O14815 690 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 ADCY8P40145 1251 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 RSAD2Q8WXG1 361 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 TBC1D31Q96DN5 1066 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 CABS1Q96KC9 395 aa20.65■□□□□ 0.9
MBD3-201ENST00000156825 ATP1A2P50993 1020 aa20.64■□□□□ 0.9
MBD3-201ENST00000156825 CEP85LQ5SZL2 805 aa20.64■□□□□ 0.9
MBD3-201ENST00000156825 KRT26Q7Z3Y9 468 aa20.64■□□□□ 0.9
MBD3-201ENST00000156825 STRBPQ96SI9 672 aaKnown RBP20.64■□□□□ 0.9
MBD3-201ENST00000156825 PLA2R1Q13018 1463 aa20.64■□□□□ 0.9
MBD3-201ENST00000156825 TTC31Q49AM3 519 aaPredicted RBP20.64■□□□□ 0.9
MBD3-201ENST00000156825 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.64■□□□□ 0.9
MBD3-201ENST00000156825 RCOR1Q9UKL0 485 aa20.64■□□□□ 0.9
MBD3-201ENST00000156825 INO80B-WBP1J3KQ70 363 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 RXRBP28702 533 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 RBL2Q08999 1139 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 KCTD2Q14681 263 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 INO80BQ9C086 356 aaPredicted RBP20.64■□□□□ 0.89
MBD3-201ENST00000156825 ZMYND10O75800 440 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 CDK8P49336 464 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 MESDQ14696 234 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 FYB2Q5VWT5 728 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 PNMA8AQ86V59 439 aaPredicted RBP20.64■□□□□ 0.89
MBD3-201ENST00000156825 HAUS4Q9H6D7 363 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 SWAP70Q9UH65 585 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 MAN1B1Q9UKM7 699 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 ANKARQ7Z5J8 1434 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 SYNMO15061 1565 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 C21orf2O43822 256 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 GTF2A1P52655 376 aaPredicted RBP20.64■□□□□ 0.89
MBD3-201ENST00000156825 LACTBP83111 547 aaPredicted RBP20.64■□□□□ 0.89
MBD3-201ENST00000156825 KRT81Q14533 505 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 DPP9Q86TI2 863 aa20.64■□□□□ 0.89
MBD3-201ENST00000156825 CACTINQ8WUQ7 758 aaKnown RBP20.64■□□□□ 0.89
MBD3-201ENST00000156825 METTL14Q9HCE5 456 aaKnown RBP20.64■□□□□ 0.89
MBD3-201ENST00000156825 SLC44A5Q8NCS7 719 aa20.63■□□□□ 0.89
MBD3-201ENST00000156825 ATP10DQ9P241 1426 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms