RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 ADSSL1Q8N142 457 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 SERPINB13Q9UIV8 391 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 TFR2Q9UP52 801 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 ATP6V0A2Q9Y487 856 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 COL23A1Q86Y22 540 aaPredicted RBP14.71□□□□□ -0.05
CTNS-201ENST00000046640 ANKRD20A12PQ8NF67 263 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 FAM163AQ96GL9 167 aaPredicted RBP14.71□□□□□ -0.05
CTNS-201ENST00000046640 PNKPQ96T60 521 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 PYM1Q9BRP8 204 aaKnown RBP14.71□□□□□ -0.05
CTNS-201ENST00000046640 PDE11AQ9HCR9 933 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 MYH8P13535 1937 aa14.71□□□□□ -0.05
CTNS-201ENST00000046640 NAV1Q8NEY1 1877 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 N4BP1O75113 896 aaKnown RBP14.71□□□□□ -0.06
CTNS-201ENST00000046640 KRT9P35527 623 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 SNAP25P60880 206 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 GALNT17Q6IS24 598 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 CDC42EP5Q6NZY7 148 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 ZSCAN29Q8IWY8 852 aaPredicted RBP14.71□□□□□ -0.06
CTNS-201ENST00000046640 RABGGTAQ92696 567 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 PANX2Q96RD6 677 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 CHP1Q99653 195 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 SLF1Q9BQI6 1058 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 SLC39A2Q9NP94 309 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 KBTBD4Q9NVX7 518 aa14.71□□□□□ -0.06
CTNS-201ENST00000046640 LIMA1Q9UHB6 759 aaKnown RBP14.71□□□□□ -0.06
CTNS-201ENST00000046640 LY75O60449 1722 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 DDX60LQ5H9U9 1706 aaKnown RBP14.7□□□□□ -0.06
CTNS-201ENST00000046640 SRGNP10124 158 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 KLK7P49862 253 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 ERVK-24P63145 666 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 SKIDA1Q1XH10 827 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 ADGRF4Q8IZF3 695 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 HINFPQ9BQA5 517 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 NUDT12Q9BQG2 462 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 COA1Q9GZY4 146 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 VPS18Q9P253 973 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 TRIM10Q9UDY6 481 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 B4DLN1 442 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 USP17L10C9JJH3 530 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 MMP10P09238 476 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 MMTAG2Q9BU76 263 aaKnown RBP14.7□□□□□ -0.06
CTNS-201ENST00000046640 CCSER1Q9C0I3 900 aa14.7□□□□□ -0.06
CTNS-201ENST00000046640 PPP1R11O60927 126 aaPredicted RBP14.69□□□□□ -0.06
CTNS-201ENST00000046640 ADCY7P51828 1080 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 CALCRLQ16602 461 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 CT47A1Q5JQC4 288 aaPredicted RBP14.69□□□□□ -0.06
CTNS-201ENST00000046640 SLC27A3Q5K4L6 730 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 SRGAP1Q7Z6B7 1085 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 CSGALNACT2Q8N6G5 542 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 TRIM9Q9C026 710 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 ABHD10Q9NUJ1 306 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 PSMA7O14818 248 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 IDEP14735 1019 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 GABPAQ06546 454 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 ANKRD40Q6AI12 368 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 CNGA4Q8IV77 575 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 PCMTD1Q96MG8 357 aaPredicted RBP14.69□□□□□ -0.06
CTNS-201ENST00000046640 RIOX1Q9H6W3 641 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 ANKZF1Q9H8Y5 726 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 JMJD4Q9H9V9 463 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 EXOC1Q9NV70 894 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 LRWD1Q9UFC0 647 aa14.69□□□□□ -0.06
CTNS-201ENST00000046640 ENC1O14682 589 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 MARCH6O60337 910 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 TTLL1O95922 423 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 TAL1P17542 331 aaPredicted RBP14.68□□□□□ -0.06
CTNS-201ENST00000046640 SHMT1P34896 483 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 PDE4CQ08493 712 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 NCAPH2Q6IBW4 605 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 ABCB6Q9NP58 842 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 ADAM21Q9UKJ8 722 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 GUCA1BQ9UMX6 200 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 TTC26A0AVF1 554 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 CTAGE9A4FU28 777 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 H7C1D1 291 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 STIM1Q13586 685 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 APOBEC3HQ6NTF7 200 aaKnown RBP14.68□□□□□ -0.06
CTNS-201ENST00000046640 CERS3Q8IU89 383 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 GDAP1L1Q96MZ0 367 aa14.68□□□□□ -0.06
CTNS-201ENST00000046640 LRRC10BA6NIK2 292 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L15C9J2P7 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L13C9JLJ4 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L11C9JVI0 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L18D6R9N7 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L22D6RA61 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L17D6RBQ6 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L19D6RCP7 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L20D6RJB6 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 EDIL3O43854 480 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 RHOBTB3O94955 611 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 CAPN2P17655 700 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L24Q0WX57 530 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 USP17L6PQ6QN14 398 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 GIMAP8Q8ND71 665 aaPredicted RBP14.67□□□□□ -0.06
CTNS-201ENST00000046640 CDK5RAP3Q96JB5 506 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 MAGEC2Q9UBF1 373 aaPredicted RBP14.67□□□□□ -0.06
CTNS-201ENST00000046640 CDC23Q9UJX2 597 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 MYH1P12882 1939 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 LAD1O00515 517 aa14.67□□□□□ -0.06
CTNS-201ENST00000046640 APBA3O96018 575 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms