RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 ZEB2O60315 1214 aa18.65■□□□□ 0.58
ERCC1-201ENST00000013807 EDNRBP24530 442 aa18.65■□□□□ 0.58
ERCC1-201ENST00000013807 PPIGQ13427 754 aaKnown RBP eCLIP18.65■□□□□ 0.581e-6■■■□□ 18.4
ERCC1-201ENST00000013807 CXCL17Q6UXB2 119 aa18.65■□□□□ 0.58
ERCC1-201ENST00000013807 C16orf59Q7L2K0 433 aa18.65■□□□□ 0.58
ERCC1-201ENST00000013807 FBXO16Q8IX29 292 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-201ENST00000013807 VTI1AQ96AJ9 217 aa18.65■□□□□ 0.58
ERCC1-201ENST00000013807 PURBQ96QR8 312 aaKnown RBP18.65■□□□□ 0.58
ERCC1-201ENST00000013807 CDX2Q99626 313 aaPredicted RBP18.65■□□□□ 0.58
ERCC1-201ENST00000013807 MTMR7Q9Y216 660 aa18.65■□□□□ 0.58
ERCC1-201ENST00000013807 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.64■□□□□ 0.57
ERCC1-201ENST00000013807 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.64■□□□□ 0.57
ERCC1-201ENST00000013807 ITGA7Q13683 1181 aa18.64■□□□□ 0.57
ERCC1-201ENST00000013807 CWC27Q6UX04 472 aaKnown RBP18.64■□□□□ 0.57
ERCC1-201ENST00000013807 KIAA1211Q6ZU35 1233 aa18.64■□□□□ 0.57
ERCC1-201ENST00000013807 NOL8Q76FK4 1167 aaKnown RBP18.64■□□□□ 0.57
ERCC1-201ENST00000013807 DNERQ8NFT8 737 aa18.64■□□□□ 0.57
ERCC1-201ENST00000013807 EXOC6Q8TAG9 804 aa18.64■□□□□ 0.57
ERCC1-201ENST00000013807 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.64■□□□□ 0.573e-7■■□□□ 11.7
ERCC1-201ENST00000013807 DDX49Q9Y6V7 483 aaKnown RBP18.64■□□□□ 0.57
ERCC1-201ENST00000013807 NEDD4P46934 1319 aa18.64■□□□□ 0.57
ERCC1-201ENST00000013807 CHD9Q3L8U1 2897 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 TMEM240Q5SV17 173 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 TMEM63BQ5T3F8 832 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 RNF207Q6ZRF8 634 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 EEPD1Q7L9B9 569 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 IQCA1Q86XH1 822 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 TMEM199Q8N511 208 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 FAM161BQ96MY7 647 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 GBF1Q92538 1859 aa18.63■□□□□ 0.57
ERCC1-201ENST00000013807 CSF2RAP15509 400 aa18.62■□□□□ 0.57
ERCC1-201ENST00000013807 RPS6P62753 249 aaKnown RBP18.62■□□□□ 0.57
ERCC1-201ENST00000013807 WDR11Q9BZH6 1224 aa18.62■□□□□ 0.57
ERCC1-201ENST00000013807 DIAPH3Q9NSV4 1193 aa18.62■□□□□ 0.57
ERCC1-201ENST00000013807 ZSWIM5Q9P217 1185 aa18.62■□□□□ 0.57
ERCC1-201ENST00000013807 CTNNA3Q9UI47 895 aa18.62■□□□□ 0.57
ERCC1-201ENST00000013807 PTPDC1A2A3K4 754 aa18.61■□□□□ 0.57
ERCC1-201ENST00000013807 NKRFO15226 690 aaKnown RBP eCLIP18.61■□□□□ 0.57
ERCC1-201ENST00000013807 KDM4AO75164 1064 aa18.61■□□□□ 0.57
ERCC1-201ENST00000013807 PSRC1Q6PGN9 363 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-201ENST00000013807 SLC30A10Q6XR72 485 aa18.61■□□□□ 0.57
ERCC1-201ENST00000013807 PNMA1Q8ND90 353 aa18.61■□□□□ 0.57
ERCC1-201ENST00000013807 ZSCAN10Q96SZ4 725 aaPredicted RBP18.61■□□□□ 0.57
ERCC1-201ENST00000013807 B4DLN1 442 aa18.6■□□□□ 0.57
ERCC1-201ENST00000013807 PTGS1P23219 599 aa18.6■□□□□ 0.57
ERCC1-201ENST00000013807 MRPL12P52815 198 aaKnown RBP18.6■□□□□ 0.57
ERCC1-201ENST00000013807 ASPRV1Q53RT3 343 aa18.6■□□□□ 0.57
ERCC1-201ENST00000013807 MPHOSPH6Q99547 160 aaKnown RBP18.6■□□□□ 0.57
ERCC1-201ENST00000013807 ZKSCAN3Q9BRR0 538 aa18.6■□□□□ 0.57
ERCC1-201ENST00000013807 IL23AQ9NPF7 189 aa18.6■□□□□ 0.57
ERCC1-201ENST00000013807 POLR3EQ9NVU0 708 aa18.6■□□□□ 0.57
ERCC1-201ENST00000013807 TRIP12Q14669 1992 aaPredicted RBP18.6■□□□□ 0.57
ERCC1-201ENST00000013807 MYH7BA7E2Y1 1941 aa18.6■□□□□ 0.57
ERCC1-201ENST00000013807 DNAJB2P25686 324 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 CALML3P27482 149 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 CPT1AP50416 773 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 PURAQ00577 322 aaKnown RBP18.59■□□□□ 0.57
ERCC1-201ENST00000013807 IMMTQ16891 758 aaKnown RBP18.59■□□□□ 0.57
ERCC1-201ENST00000013807 ZNF365Q70YC5 407 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 ENAHQ8N8S7 591 aaPredicted RBP18.59■□□□□ 0.57
ERCC1-201ENST00000013807 SCFD2Q8WU76 684 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 HERVK_113Q902F9 699 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 KRT23Q9C075 422 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 HIPK3Q9H422 1215 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 CNNM2Q9H8M5 875 aa18.59■□□□□ 0.57
ERCC1-201ENST00000013807 BAZ2BQ9UIF8 2168 aaKnown RBP18.58■□□□□ 0.57
ERCC1-201ENST00000013807 A6NJR5 290 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 B4E1Z4 1266 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 B4GALT4O60513 344 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 GOLGA8HP0CJ92 632 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 CYP2C18P33260 490 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.58■□□□□ 0.56
ERCC1-201ENST00000013807 ADGRF4Q8IZF3 695 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 NOC4LQ9BVI4 516 aaKnown RBP18.58■□□□□ 0.56
ERCC1-201ENST00000013807 PPP1R12CQ9BZL4 782 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 UBA5Q9GZZ9 404 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 ALDH8A1Q9H2A2 487 aaPredicted RBP18.58■□□□□ 0.56
ERCC1-201ENST00000013807 KAT14Q9H8E8 782 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 VCANP13611 3396 aa18.58■□□□□ 0.56
ERCC1-201ENST00000013807 SCN5AQ14524 2016 aa18.57■□□□□ 0.56
ERCC1-201ENST00000013807 ABCB11O95342 1321 aa18.57■□□□□ 0.56
ERCC1-201ENST00000013807 KPNA6O60684 536 aa18.57■□□□□ 0.56
ERCC1-201ENST00000013807 SUPT20HL2P0C7V6 817 aa18.57■□□□□ 0.56
ERCC1-201ENST00000013807 PDE4DQ08499 809 aa18.57■□□□□ 0.56
ERCC1-201ENST00000013807 YTHDC1Q96MU7 727 aaKnown RBP18.57■□□□□ 0.56
ERCC1-201ENST00000013807 TRPV6Q9H1D0 765 aa18.57■□□□□ 0.56
ERCC1-201ENST00000013807 TNKSO95271 1327 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 PSMC6P62333 389 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 GHRHRQ02643 423 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 PPP2R5BQ15173 497 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 SEC23AQ15436 765 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 CDC37Q16543 378 aaPredicted RBP18.56■□□□□ 0.56
ERCC1-201ENST00000013807 CCDC62Q6P9F0 684 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 MAFAQ8NHW3 353 aaPredicted RBP18.56■□□□□ 0.56
ERCC1-201ENST00000013807 MYLIPQ8WY64 445 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 VWCEQ96DN2 955 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 MTG1Q9BT17 334 aaPredicted RBP18.56■□□□□ 0.56
ERCC1-201ENST00000013807 IL25Q9H293 177 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 CPVLQ9H3G5 476 aa18.56■□□□□ 0.56
ERCC1-201ENST00000013807 ZNF576Q9H609 170 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms