RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Ccdc172Q810N9 267 aa34.72■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Mrpl58Q8R035 206 aa34.72■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Ces1Q8VCC2 565 aa34.72■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Cntnap2Q9CPW0 1332 aa34.72■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Rassf3Q99P51 232 aa34.71■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Myo1hQ9D6A1 958 aa34.71■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Gml2G5E8L7 176 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Ccng2O08918 344 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Atp9bP98195 1146 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Gjb4Q02738 266 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 NfiaQ02780 532 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Zbtb7bQ64321 544 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Aoc2Q812C9 757 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Tmem60Q8K174 133 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 F11Q91Y47 624 aa34.7■■■■□ 3.15
Ctdnep1-201ENSMUST00000108593 Gm7356A0A087WSA6 508 aa34.7■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Oip5A2AQ14 241 aa34.7■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 MarcksP26645 309 aaKnown RBP34.7■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Zfp317Q8C0Q5 607 aa34.7■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Twf2Q9Z0P5 349 aaKnown RBP34.7■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 LtkP08923 888 aa34.69■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Nf2P46662 596 aa34.69■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Zdhhc9P59268 364 aa34.69■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Rsph3aQ3UFY4 516 aa34.69■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Nt5c2Q3V1L4 560 aa34.69■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Lrrc56Q8K375 552 aa34.69■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Ttc6G3UYY4 1857 aa34.69■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Gm15262A0A140LIQ5 728 aa34.67■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Lrrcc1Q69ZB0 1026 aa34.67■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Znf704Q9ERQ3 566 aa34.67■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Trdmt1O55055 415 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 SfnO70456 248 aaKnown RBP34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Nol12Q8BG17 217 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Nim1kQ8BHI9 436 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Ubxn11Q9D572 484 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Pgap3A2A559 320 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Zfp957Q3UT76 567 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Ccdc66Q6NS45 935 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Amer2Q8CCJ4 672 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 AdpgkQ8VDL4 496 aa34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Npm3Q9CPP0 175 aaKnown RBP34.66■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 NfkbieO54910 364 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Itgb5O70309 798 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Muc1Q02496 630 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 DSCC1Q14AI0 399 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 YdjcQ14BV6 310 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Clul1Q3ZRW6 464 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Prkag3Q8BGM7 489 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Arpp21Q9DCB4 807 aa34.65■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 AW822073A0A0N4SUK1 652 aa34.64■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 PogkQ80TC5 607 aa34.64■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Znf784Q8BI69 297 aa34.64■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Hs2st1Q8R3H7 356 aa34.64■■■■□ 3.14
Ctdnep1-201ENSMUST00000108593 Gm3138K7N754 218 aa34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Api5O35841 504 aaKnown RBP34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Lnx1O70263 728 aa34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Moxd2Q7TT41 619 aa34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Rnf208Q8K0W3 265 aa34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Tspyl4Q8VD63 406 aa34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Srrm1Q52KI8 946 aaKnown RBP34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Atg4cQ811C2 458 aa34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Sec62Q8BU14 398 aaKnown RBP34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Tbx20Q9ES03 445 aa34.63■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Gm4758L7N258 96 aa34.62■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Trappc10Q3TLI0 1259 aa34.62■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Osbpl2Q8BX94 484 aa34.62■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Kcnv2Q8CFS6 562 aa34.62■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Mad1l1Q9WTX8 717 aaKnown RBP34.62■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Kiaa1211Q5PR69 1207 aa34.61■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Rusc1Q8BG26 893 aa34.61■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Cntnap5cQ0V8T7 1305 aa34.6■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 A0A0U1RNP2 1173 aa34.6■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Cyp26c1B2RXA7 518 aa34.6■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Pgk2P09041 417 aa34.6■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Epha2Q03145 977 aa34.6■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Fam155aQ8CCS2 467 aa34.6■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Apobec3Q99J72 440 aaKnown RBP34.6■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Pdzrn4E9PUZ9 1014 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Ubash3aQ3V3E1 624 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Madcam1Q61826 405 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Cdkn2aipQ8BI72 563 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Trib2Q8K4K3 343 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Plcd1Q8R3B1 756 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Lypla2Q9WTL7 231 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Astn1Q61137 1302 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Kcna2P63141 499 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Grm1P97772 1199 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 PtmsQ9D0J8 101 aaKnown RBP34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Snx29Q9D3S3 818 aa34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 PfkpQ9WUA3 784 aaKnown RBP34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 AdnpQ9Z103 1108 aaKnown RBP34.59■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 AunipE9Q6Z5 340 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Ampd3O08739 766 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Tdo2P48776 406 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Krt87Q6IMF0 495 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Nap1l4Q78ZA7 375 aaKnown RBP34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Tdp1Q8BJ37 609 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 Rassf10Q8BL43 508 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 R3hcc1Q8BSI6 488 aa34.58■■■■□ 3.13
Ctdnep1-201ENSMUST00000108593 NenfQ9CQ45 171 aa34.58■■■■□ 3.13
Retrieved 100 of 22,080 RNA–protein pairs in 15.7 ms