RNA–Protein interactions for RNA: ENSMUST00000057438.6

Vcpip1-201, Transcript of Deubiquitinating protein VCIP135, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcpip1, Length 9,749 nt, Biotype protein coding, Subcellular localisation Nucleus, Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1-201ENSMUST00000057438 Ctnnd1P30999 938 aaKnown RBP13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Wdr36Q3TAQ9 899 aaKnown RBP13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Psmg1Q9JK23 289 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 A0A1W2P6Q8 802 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Gm9048A0A1W2P7H4 802 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 A0A1W2P7Z8 802 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Gm9046A0A1W2P855 802 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 AmphQ7TQF7 686 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Nek8Q91ZR4 698 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Sdr42e1Q9D665 394 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Pdcd7Q9WTY1 482 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Rab3ipQ68EF0 428 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 OcrlQ6NVF0 900 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Cdk5rap3Q99LM2 503 aa13.46□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Ccdc194A0A140LIT1 234 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Sycp3P70281 254 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Atp1a3Q6PIC6 1013 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Zfp651E9PZ11 729 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Q80ZQ3 298 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 PodnQ7TQ62 611 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 L3mbtl3Q8BLB7 883 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Fermt3Q8K1B8 665 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 JrklB2RRL2 523 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Timm10P62073 90 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Znf652Q5DU09 608 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Cdcp1Q5U462 833 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 BcrQ6PAJ1 1270 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Ppp2r5aQ6PD03 486 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Q9DAQ4 598 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Q3TTJ4 293 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Pex19Q8VCI5 299 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Prmt9Q3U3W5 846 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Cfap36Q8C6E0 343 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Erp44Q9D1Q6 406 aa13.45□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 IvlP48997 467 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Rnf207Q3V3A7 635 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Ushbp1Q8R370 680 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Spag17Q5S003 2320 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Aggf1Q7TN31 711 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Prdm11A2AGX3 565 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Mmrn2A6H6E2 943 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Zfp174B9EJW5 407 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Esco1Q69Z69 843 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 E4f1Q8CCE9 783 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Med7Q9CZB6 233 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Otud7bB2RUR8 840 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Tmod1P49813 359 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 CalcaP70160 136 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Atp8a1P70704 1164 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Git1Q68FF6 770 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Epn1Q80VP1 575 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Grtp1Q9D3N8 359 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Prdm2A2A7B5 1709 aaKnown RBP13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Gm12185Q5NCB2 835 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Itih1Q61702 907 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Sf3a3Q9D554 501 aaKnown RBP13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Zscan2Q07230 614 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 4932411N23RikQ8C0S0 470 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Prkag2Q91WG5 566 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Xrcc6P23475 608 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Lzts1P60853 599 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Slc27a1Q60714 646 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Mapkapk5O54992 473 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 XpcP51612 930 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Rassf6Q80UQ2 353 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Dnajc10Q9DC23 793 aa13.44□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Ccnyl1D3YUJ3 367 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 1700029H14RikE9PY36 240 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 DSCC1Q14AI0 399 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Panx2Q6IMP4 677 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Slc4a7Q8BTY2 1034 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 TnnQ80Z71 1560 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Pcyt1aP49586 367 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 ItkQ03526 625 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Cadps2Q8BYR5 1297 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 IdeQ9JHR7 1019 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Cyth3O08967 399 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Prpsap2Q8R574 369 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Tmod4Q9JLH8 345 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Syngap1F6SEU4 1340 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Traf5P70191 558 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Bach1P97302 739 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 ThrspQ62264 150 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Appl2Q8K3G9 662 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Znf638Q61464 1960 aaKnown RBP13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Grin1P35438 938 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Polr2fP61219 127 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Ovgp1Q62010 721 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Snx19Q6P4T1 997 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Bend3Q6PAL0 825 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Cttnbp2nlQ99LJ0 638 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 3830403N18RikQ9D6C3 208 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Ndc80Q9D0F1 642 aaKnown RBP13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Rnf14Q9JI90 485 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Cyth1Q9QX11 398 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Znf518aB2RRF6 1478 aaKnown RBP13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Plbd2Q3TCN2 594 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Nlrp4fQ66X05 959 aa13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Wbp11Q923D5 641 aaKnown RBP13.43□□□□□ -0.26
Vcpip1-201ENSMUST00000057438 Rtn3Q9ES97 964 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 31.2 ms