RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Aak1Q3UHJ0 959 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Mkrn3Q60764 544 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 NntQ61941 1086 aaKnown RBP17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Cyp4f39Q8BGU0 532 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Epha10Q8BYG9 1007 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Sde2Q8K1J5 448 aaKnown RBP17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Ddx54Q8K4L0 874 aaKnown RBP17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 GlyctkQ8QZY2 523 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 NsmfQ99NF2 532 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Ubxn6Q99PL6 442 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 SyncQ9EPM5 470 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Clip2Q9Z0H8 1047 aa17.93■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Tcp1P11983 556 aaKnown RBP17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Usp53P15975 1069 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Grm4Q68EF4 912 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Asic1Q6NXK8 526 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Lca5Q80ST9 704 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Trim6Q8BGE7 488 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Smtnl1Q99LM3 459 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 TbcbQ9D1E6 244 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Adarb2Q9JI20 745 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Mkrn1Q9QXP6 481 aa17.92■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Enc1O35709 589 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Epb41l4aP52963 686 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Fam83bQ0VBM2 1012 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Kcnj11Q61743 390 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Srrm3Q80WV7 648 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Kif2bQ8C0N1 668 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Tjap1Q9DCD5 539 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Fxr2Q9WVR4 673 aaKnown RBP17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 JcadQ5DTX6 1320 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Pabpc1lA2A5N3 607 aaKnown RBP17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Nr1i3O35627 358 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Kcna1P16388 495 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Sh3gl2Q62420 352 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Igsf3Q6ZQA6 1194 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 PpanQ91YU8 470 aaKnown RBP17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Glrx3Q9CQM9 337 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Dynll2Q9D0M5 89 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Peg12Q9WVA7 283 aa17.91■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Flt1P35969 1333 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Lrrc6O88978 473 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 PtgdrP70263 357 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Atp1b3P97370 278 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Pnma5Q5DTT8 618 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Tnni3kQ5GIG6 834 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Antxr2Q6DFX2 487 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Recql4Q75NR7 1216 aaKnown RBP17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Ccdc172Q810N9 267 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Tmem179Q8BHH9 233 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Slc9b1Q8C0X2 565 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Rcor2Q8C796 523 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Psmd2Q8VDM4 908 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Ndst4Q9EQW8 872 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Trp53inp1Q9QXE4 239 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Knop1Q9Z2Q2 478 aaKnown RBP17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Ltbp2O08999 1813 aa17.9■□□□□ 0.46
Ttc39b-202ENSMUST00000048274 Aknad1E9Q8N6 675 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Kifc2O08672 792 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Nfil3O08750 462 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Prl2c3P04768 224 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 LdhaP06151 332 aaKnown RBP17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Mboat4P0C7A3 435 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Exoc8Q6PGF7 716 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Znf131Q8K3J5 619 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Kbtbd4Q8R179 534 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Dbndd1Q9CZ00 160 aa17.89■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm28919A0A087WP35 240 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm4985A2ALC6 410 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Pla2g4aP47713 748 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 EgfrQ01279 1210 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 MyrflQ3UN70 904 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Cep70Q6IQY5 616 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Tlr13Q6R5N8 991 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 HlfQ8BW74 295 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Pym1Q8CHP5 203 aaKnown RBP17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Tbc1d23Q8K0F1 684 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 P3h4Q8K2B0 443 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Grin3bQ91ZU9 1003 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 HibadhQ99L13 335 aaKnown RBP17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Ccdc96Q9CR92 584 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Coro7Q9D2V7 922 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 March8Q9DBD2 286 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Cacna1sQ02789 1880 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Chd5A2A8L1 1946 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Gm3893E9Q1I1 302 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Ubap1lG3UW59 384 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Lig1P37913 916 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Sept2P42208 361 aaKnown RBP17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Trim43aQ3TL54 445 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Znf280dQ68FE8 974 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Jade2Q6ZQF7 829 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 OplahQ8K010 1288 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Atp1a1Q8VDN2 1023 aaKnown RBP17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Krt79Q8VED5 531 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Eif4a3Q91VC3 411 aaKnown RBP17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Xrcc4Q924T3 326 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Krt82Q99M74 516 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 EhhadhQ9DBM2 718 aa17.88■□□□□ 0.45
Ttc39b-202ENSMUST00000048274 Nup188Q6ZQH8 1759 aa17.88■□□□□ 0.45
Retrieved 100 of 22,080 RNA–protein pairs in 25.6 ms