RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Jakmip2D3YXK0 820 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Pde4aO89084 844 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Pdia4P08003 638 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Siah1bQ06985 282 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Lgr6Q3UVD5 967 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Foxn3Q499D0 457 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Jakmip3Q5DTN8 844 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Vil1Q62468 827 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Ndfip2Q91ZP6 311 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Gnl2Q99LH1 728 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 GrapQ9CX99 217 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Vav3Q9R0C8 847 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Parp1P11103 1013 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Asic1Q6NXK8 526 aa25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Peg10Q7TN75 958 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Nop9Q8BMC4 636 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Brd3Q8K2F0 726 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Rbm42Q91V81 474 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 Dhx30Q99PU8 1217 aaKnown RBP25.79■■□□□ 1.72
Cln6-201ENSMUST00000034776 PpardP35396 440 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Mcm6P97311 821 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Map3k9Q3U1V8 1077 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Serpina10Q8R121 448 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Bst2Q8R2Q8 172 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 F11Q91Y47 624 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Tor1aip1Q921T2 595 aaKnown RBP25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Chaf1aQ9QWF0 911 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Mical3Q8CJ19 1993 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Mpp3O88910 568 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Surf1P09925 306 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Stim1P70302 685 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Gpatch11Q3UFS4 262 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 TfrcQ62351 763 aaKnown RBP25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 LdhdQ7TNG8 484 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Kbtbd13Q8C828 458 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Tmem63cQ8CBX0 802 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 MyripQ8K3I4 856 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Tmem134Q8R0J4 195 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 HyiQ8R1F5 277 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Efhd1Q9D4J1 240 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 SelenooQ9DBC0 667 aa25.78■■□□□ 1.72
Cln6-201ENSMUST00000034776 Ddx23D3Z0M9 819 aaKnown RBP25.77■■□□□ 1.72
Cln6-201ENSMUST00000034776 Setd4P58467 439 aa25.77■■□□□ 1.72
Cln6-201ENSMUST00000034776 Frat1P70339 274 aa25.77■■□□□ 1.72
Cln6-201ENSMUST00000034776 Dppa3Q8QZY3 150 aa25.77■■□□□ 1.72
Cln6-201ENSMUST00000034776 Snapc2Q91XA5 359 aa25.77■■□□□ 1.72
Cln6-201ENSMUST00000034776 Grpel1Q99LP6 217 aa25.77■■□□□ 1.72
Cln6-201ENSMUST00000034776 Ccdc88cQ6VGS5 2009 aa25.76■■□□□ 1.72
Cln6-201ENSMUST00000034776 FosP01101 380 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Ssrp1Q08943 708 aaKnown RBP25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Sfi1Q3UZY0 1216 aaKnown RBP25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Prr7Q3V0I2 269 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Atp13a3Q5XF89 1219 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Kdm1aQ6ZQ88 853 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Copb1Q9JIF7 953 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Tfr2Q9JKX3 798 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Pcdha4O88689 947 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Cap1P40124 474 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Ap5z1Q3U829 807 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Stxbp2Q64324 593 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Olfr832Q7TRG9 312 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Mical1Q8VDP3 1048 aa25.76■■□□□ 1.71
Cln6-201ENSMUST00000034776 Nedd4P46935 887 aaKnown RBP25.75■■□□□ 1.71
Cln6-201ENSMUST00000034776 Trpc6Q61143 930 aa25.75■■□□□ 1.71
Cln6-201ENSMUST00000034776 Tut1Q8R3F9 869 aa25.75■■□□□ 1.71
Cln6-201ENSMUST00000034776 Kremen1Q99N43 473 aa25.75■■□□□ 1.71
Cln6-201ENSMUST00000034776 Rhobtb3Q9CTN4 611 aa25.75■■□□□ 1.71
Cln6-201ENSMUST00000034776 Scn3aA2ASI5 1947 aa25.75■■□□□ 1.71
Cln6-201ENSMUST00000034776 Pcif1P59114 706 aa25.75■■□□□ 1.71
Cln6-201ENSMUST00000034776 Gm5934D3Z4U6 212 aa25.74■■□□□ 1.71
Cln6-201ENSMUST00000034776 Acot10Q32MW3 439 aa25.74■■□□□ 1.71
Cln6-201ENSMUST00000034776 Xxylt1Q3U4G3 392 aa25.74■■□□□ 1.71
Cln6-201ENSMUST00000034776 Gucy2cQ3UWA6 1072 aa25.74■■□□□ 1.71
Cln6-201ENSMUST00000034776 Churc1Q6DG52 112 aa25.74■■□□□ 1.71
Cln6-201ENSMUST00000034776 Thap3Q8BJ25 218 aa25.74■■□□□ 1.71
Cln6-201ENSMUST00000034776 Igdcc3Q8BQC3 813 aa25.74■■□□□ 1.71
Cln6-201ENSMUST00000034776 Gm45140A0A0N4SUM8 220 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Mroh8E9PYI4 1049 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Ccdc121E9Q6D3 323 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 LdhbP16125 334 aaKnown RBP25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Sdccag8Q80UF4 717 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Dcaf8Q8N7N5 591 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Kbtbd4Q8R179 534 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 4921524L21RikQ9D5T2 438 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 IkQ9Z1M8 557 aaKnown RBP25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Rfpl4bJ3QPR6 266 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Ccdc93Q7TQK5 629 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 Usp31E9Q6Y8 1344 aa25.73■■□□□ 1.71
Cln6-201ENSMUST00000034776 AoahO35298 574 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Ms4a1P19437 291 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Nf2P46662 596 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Nlrp2Q4PLS0 1046 aaKnown RBP25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 NapaQ9DB05 295 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Map9Q3TRR0 646 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Nt5c2Q3V1L4 560 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Hoxa13Q62424 386 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Zhx2Q8C0C0 836 aaKnown RBP25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Phf20l1Q8CCJ9 1013 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Exoc1Q8R3S6 894 aa25.72■■□□□ 1.71
Cln6-201ENSMUST00000034776 Ovgp1Q62010 721 aa25.71■■□□□ 1.71
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms