RNA–Protein interactions for RNA: YGL006W

PMC1, Transcript of Vacuolar Ca2+ ATPase involved in depleting cytosol of Ca2+ ions, yeast

Gene PMC1, Length 3,522 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PMC1	YGL006W	RAD7	P06779	565 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	DST1	P07273	309 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
PMC1	YGL006W	TSR4	P25040	408 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	DMC1	P25453	334 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	YCR090C	P25654	182 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	COX13	P32799	129 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	URA8	P38627	578 aa	Predicted RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	YHR218W	P38899	603 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	MTW1	P39731	289 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	ZAP1	P47043	880 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	MPS3	P47069	682 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	NQM1	P53228	333 aa	Predicted RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	SOL4	P53315	255 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	PRP38	Q00723	242 aa	Predicted RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	ECM9	Q02202	377 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	CDD1	Q06549	142 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	YDL073W	Q07454	984 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	RAD52	P06778	471 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	SEC53	P07283	254 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	GLN4	P13188	809 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	GAP1	P19145	602 aa	Predicted RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	PET309	P32522	965 aa	Predicted RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	GPX2	P38143	162 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	YHB1	P39676	399 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	SER3	P40054	469 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	MNN11	P46985	422 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	RPS7B	P48164	190 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	YPT32	P51996	222 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	GTR2	P53290	341 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	BUD32	P53323	261 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	YNL018C	P53976	612 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	SNU56	Q03782	492 aa	Known RBP	4.17	□□□□□ -1.74
PMC1	YGL006W	BSC2	Q05611	235 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	YPR196W	Q06595	470 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	FEX2	Q08991	375 aa		4.17	□□□□□ -1.74
PMC1	YGL006W	HEM2	P05373	342 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	MAS2	P11914	482 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	KIN3	P22209	435 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	PTC6	P25646	442 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	CIN8	P27895	1000 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	HYM1	P32464	399 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	RTG2	P32608	588 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	PTM1	P32857	523 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	CLG1	P35190	452 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	APM3	P38153	483 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	MMS4	P38257	691 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	ARN2	P38724	620 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	CEM1	P39525	442 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	RSP5	P39940	809 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	PHM8	P40025	321 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	GYP8	P43570	497 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	ROK1	P45818	564 aa	Predicted RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	RPS10B	P46784	105 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	ARP4	P80428	489 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	ARX1	Q03862	593 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	AAD4	Q07747	329 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	YNG1	Q08465	219 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	RPS10A	Q08745	105 aa	Predicted RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	CFT2	Q12102	859 aa	Predicted RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	ACF2	Q12168	779 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	GTT2	Q12390	233 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	MHF2	Q3E829	80 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	ADE4	P04046	510 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	CBP1	P07252	654 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	PBS2	P08018	668 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	SFP1	P32432	683 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	LYP1	P32487	611 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	IMP3	P32899	183 aa	Predicted RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	MCM7	P38132	845 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	RIM4	P38741	713 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	LYS9	P38999	446 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	DHH1	P39517	506 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	DDI1	P40087	428 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	HOC1	P47124	396 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	TPN1	P53099	579 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	PEX13	P80667	386 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	MUK1	Q02866	612 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	MET31	Q03081	177 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	RCO1	Q04779	684 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	PMT7	Q06644	662 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	ECM30	Q06673	1274 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	DNL4	Q08387	944 aa	Predicted RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	YGK3	Q12222	375 aa	Predicted RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	RPS9A	O13516	197 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	PUT4	P15380	627 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	GUK1	P15454	187 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	UGA1	P17649	471 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	YHK8	P38776	514 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	GIC1	P38785	314 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	YEL028W	P39989	153 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	ROM1	P53046	1155 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	RBG2	P53295	368 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	KTR6	P54070	446 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	STP1	Q00947	519 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	MEH1	Q02205	184 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	YPL107W	Q02873	248 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	YLR326W	Q06170	240 aa	Known RBP	4.16	□□□□□ -1.74
PMC1	YGL006W	OPT2	Q06593	877 aa		4.16	□□□□□ -1.74
PMC1	YGL006W	SYT1	Q06836	1226 aa		4.16	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 27.4 ms