RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C RFX1P48743 811 aa6.5□□□□□ -1.37
SHO1YER118C CGR1P53188 120 aa6.5□□□□□ -1.37
SHO1YER118C EFM6P53970 246 aa6.5□□□□□ -1.37
SHO1YER118C YLR455WQ06188 304 aa6.5□□□□□ -1.37
SHO1YER118C DFG16Q99234 619 aa6.5□□□□□ -1.37
SHO1YER118C SCH9P11792 824 aaKnown RBP6.49□□□□□ -1.37
SHO1YER118C KRE6P32486 720 aa6.49□□□□□ -1.37
SHO1YER118C YBR144CP34215 104 aa6.49□□□□□ -1.37
SHO1YER118C YKL070WP36087 169 aa6.49□□□□□ -1.37
SHO1YER118C MCX1P38323 520 aaPredicted RBP6.49□□□□□ -1.37
SHO1YER118C FKH2P41813 862 aa6.49□□□□□ -1.37
SHO1YER118C NMD5P46970 1048 aa6.49□□□□□ -1.37
SHO1YER118C DIA3P52290 468 aa6.49□□□□□ -1.37
SHO1YER118C SPC98P53540 846 aa6.49□□□□□ -1.37
SHO1YER118C MNT4P53745 580 aa6.49□□□□□ -1.37
SHO1YER118C CTK1Q03957 528 aaKnown RBP6.49□□□□□ -1.37
SHO1YER118C TPO1Q07824 586 aa6.49□□□□□ -1.37
SHO1YER118C ARG81P05085 880 aa6.48□□□□□ -1.37
SHO1YER118C CHS2P14180 963 aa6.48□□□□□ -1.37
SHO1YER118C MSS116P15424 664 aaKnown RBP6.48□□□□□ -1.37
SHO1YER118C KGD1P20967 1014 aaKnown RBP6.48□□□□□ -1.37
SHO1YER118C BOS1P25385 244 aa6.48□□□□□ -1.37
SHO1YER118C PHO11P35842 467 aa6.48□□□□□ -1.37
SHO1YER118C SDH8P38345 138 aa6.48□□□□□ -1.37
SHO1YER118C PHO12P38693 467 aa6.48□□□□□ -1.37
SHO1YER118C DIA4P38705 446 aaPredicted RBP6.48□□□□□ -1.37
SHO1YER118C ARO9P38840 513 aaPredicted RBP6.48□□□□□ -1.37
SHO1YER118C VHS2P40463 436 aa6.48□□□□□ -1.37
SHO1YER118C MPS2P53159 387 aa6.48□□□□□ -1.37
SHO1YER118C MTL1P53214 551 aa6.48□□□□□ -1.37
SHO1YER118C SMA2Q04658 369 aa6.48□□□□□ -1.37
SHO1YER118C ARG7Q04728 441 aa6.48□□□□□ -1.37
SHO1YER118C BCP1Q06338 283 aa6.48□□□□□ -1.37
SHO1YER118C PRB1P09232 635 aa6.47□□□□□ -1.37
SHO1YER118C SRV2P17555 526 aaKnown RBP6.47□□□□□ -1.37
SHO1YER118C ART10P18634 518 aaKnown RBP6.47□□□□□ -1.37
SHO1YER118C YSP3P25036 478 aa6.47□□□□□ -1.37
SHO1YER118C YIM1P28625 365 aa6.47□□□□□ -1.37
SHO1YER118C BCS1P32839 456 aa6.47□□□□□ -1.37
SHO1YER118C NTR2P36118 322 aaPredicted RBP6.47□□□□□ -1.37
SHO1YER118C PXL1P36166 706 aa6.47□□□□□ -1.37
SHO1YER118C YBR139WP38109 508 aa6.47□□□□□ -1.37
SHO1YER118C TCD1P38756 429 aa6.47□□□□□ -1.37
SHO1YER118C RPP1P38786 293 aa6.47□□□□□ -1.37
SHO1YER118C PTC7P38797 343 aa6.47□□□□□ -1.37
SHO1YER118C CIN1P40987 1014 aa6.47□□□□□ -1.37
SHO1YER118C FAR3P46671 204 aa6.47□□□□□ -1.37
SHO1YER118C EMC2P47133 292 aaKnown RBP6.47□□□□□ -1.37
SHO1YER118C FHN1P53279 174 aa6.47□□□□□ -1.37
SHO1YER118C SNZ1Q03148 297 aa6.47□□□□□ -1.37
SHO1YER118C STE23Q06010 1027 aa6.47□□□□□ -1.37
SHO1YER118C DCS1Q06151 350 aa6.47□□□□□ -1.37
SHO1YER118C YLR173WQ06247 608 aa6.47□□□□□ -1.37
SHO1YER118C NDL1Q06568 189 aa6.47□□□□□ -1.37
SHO1YER118C YER175W-AQ8TGU4 54 aa6.47□□□□□ -1.37
SHO1YER118C CAR1P00812 333 aaKnown RBP6.46□□□□□ -1.38
SHO1YER118C PDE2P06776 526 aa6.46□□□□□ -1.38
SHO1YER118C SSA3P09435 649 aaKnown RBP6.46□□□□□ -1.38
SHO1YER118C SAG1P20840 650 aa6.46□□□□□ -1.38
SHO1YER118C PUP3P25451 205 aaKnown RBP6.46□□□□□ -1.38
SHO1YER118C GSH1P32477 678 aa6.46□□□□□ -1.38
SHO1YER118C KKQ8P36004 724 aa6.46□□□□□ -1.38
SHO1YER118C OYE3P41816 400 aaPredicted RBP6.46□□□□□ -1.38
SHO1YER118C SPO19Q03029 223 aa6.46□□□□□ -1.38
SHO1YER118C RGC1Q06108 1083 aaKnown RBP6.46□□□□□ -1.38
SHO1YER118C MRI1Q06489 411 aaKnown RBP6.46□□□□□ -1.38
SHO1YER118C BAG7Q12128 409 aa6.46□□□□□ -1.38
SHO1YER118C NTO1Q12311 748 aa6.46□□□□□ -1.38
SHO1YER118C MDM20Q12387 796 aaKnown RBP6.46□□□□□ -1.38
SHO1YER118C MTR10Q99189 972 aa6.46□□□□□ -1.38
SHO1YER118C RPP2AP05319 106 aaKnown RBP6.45□□□□□ -1.38
SHO1YER118C UGA1P17649 471 aa6.45□□□□□ -1.38
SHO1YER118C GEX1P25596 615 aa6.45□□□□□ -1.38
SHO1YER118C MSS1P32559 526 aaPredicted RBP6.45□□□□□ -1.38
SHO1YER118C CBF5P33322 483 aaKnown RBP RIP-Chip data6.45□□□□□ -1.38not detected
SHO1YER118C AAP1P37898 856 aaKnown RBP6.45□□□□□ -1.38
SHO1YER118C LNP1P38878 278 aa6.45□□□□□ -1.38
SHO1YER118C PIG2P40187 538 aa6.45□□□□□ -1.38
SHO1YER118C AIM20P40451 204 aa6.45□□□□□ -1.38
SHO1YER118C LSB3P43603 459 aaKnown RBP6.45□□□□□ -1.38
SHO1YER118C GTO1P48239 356 aa6.45□□□□□ -1.38
SHO1YER118C TRF5P48561 642 aaKnown RBP6.45□□□□□ -1.38
SHO1YER118C BRO1P48582 844 aa6.45□□□□□ -1.38
SHO1YER118C MND1P53102 219 aa6.45□□□□□ -1.38
SHO1YER118C YIP5P53108 310 aa6.45□□□□□ -1.38
SHO1YER118C CAF130P53280 1122 aaPredicted RBP6.45□□□□□ -1.38
SHO1YER118C SLU7Q02775 382 aaKnown RBP6.45□□□□□ -1.38
SHO1YER118C MFM1Q02783 413 aa6.45□□□□□ -1.38
SHO1YER118C YMR102CQ03177 834 aa6.45□□□□□ -1.38
SHO1YER118C GAS5Q08193 484 aa6.45□□□□□ -1.38
SHO1YER118C MED4Q12343 284 aa6.45□□□□□ -1.38
SHO1YER118C GAL10P04397 699 aa6.44□□□□□ -1.38
SHO1YER118C ARG80P07249 177 aa6.44□□□□□ -1.38
SHO1YER118C RSR1P13856 272 aa6.44□□□□□ -1.38
SHO1YER118C IMG1P25626 169 aa6.44□□□□□ -1.38
SHO1YER118C MRPL7P36519 292 aa6.44□□□□□ -1.38
SHO1YER118C ARA1P38115 344 aa6.44□□□□□ -1.38
SHO1YER118C MSR1P38714 643 aa6.44□□□□□ -1.38
SHO1YER118C PIH1P38768 344 aa6.44□□□□□ -1.38
SHO1YER118C UIP3P39547 235 aa6.44□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms