RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 SLFN14P0C7P3 912 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 PLCB2Q00722 1185 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 SPICE1Q8N0Z3 855 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 DEFB129Q9H1M3 183 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 TMEM260Q9NX78 707 aa18.65■□□□□ 0.58
PHGDH-216ENST00000641375 DPCR1Q3MIW9 517 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 MCTP2Q6DN12 878 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 FBXO11Q86XK2 927 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 IQUBQ8NA54 791 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 DHX58Q96C10 678 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 HOOK2Q96ED9 719 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 BIN1O00499 593 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 PLA2G6O60733 806 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 OR52Z1P0C646 297 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 NT5DC1Q5TFE4 455 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 APOBEC3FQ8IUX4 373 aaKnown RBP18.64■□□□□ 0.57
PHGDH-216ENST00000641375 CHURC1Q8WUH1 139 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 AK8Q96MA6 479 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 TMEM60Q9H2L4 133 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 GPRC5DQ9NZD1 345 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 PCDHA5Q9Y5H7 936 aa18.64■□□□□ 0.57
PHGDH-216ENST00000641375 A0A087X0B3 334 aa18.63■□□□□ 0.57
PHGDH-216ENST00000641375 PRR12Q9ULL5 1215 aa18.63■□□□□ 0.57
PHGDH-216ENST00000641375 SCAF8Q9UPN6 1271 aaKnown RBP18.63■□□□□ 0.57
PHGDH-216ENST00000641375 UTRNP46939 3433 aa18.63■□□□□ 0.57
PHGDH-216ENST00000641375 CTNND1O60716 968 aaKnown RBP18.62■□□□□ 0.57
PHGDH-216ENST00000641375 DCAF15Q66K64 600 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 TEX2Q8IWB9 1127 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 SMARCE1Q969G3 411 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 NAP1L4Q99733 375 aaKnown RBP18.62■□□□□ 0.57
PHGDH-216ENST00000641375 A0A087WWV3 80 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 SMC2O95347 1197 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 UBE2SQ16763 222 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 FAM83BQ5T0W9 1011 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 PPP4R3AQ6IN85 833 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 TRIML1Q8N9V2 468 aa18.62■□□□□ 0.57
PHGDH-216ENST00000641375 ASTN2O75129 1339 aaPredicted RBP18.61■□□□□ 0.57
PHGDH-216ENST00000641375 MYH7BA7E2Y1 1941 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 FOXN1O15353 648 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 AP3B2Q13367 1082 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 FAM160B2Q86V87 743 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 DHX40Q8IX18 779 aaKnown RBP18.61■□□□□ 0.57
PHGDH-216ENST00000641375 SARSP49591 514 aaKnown RBP18.61■□□□□ 0.57
PHGDH-216ENST00000641375 E2F4Q16254 413 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 KIAA1755Q5JYT7 1200 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 SH3RF1Q7Z6J0 888 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 SPATA20Q8TB22 786 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 CCSER1Q9C0I3 900 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 CCDC39Q9UFE4 941 aa18.61■□□□□ 0.57
PHGDH-216ENST00000641375 GCFC2P16383 781 aaKnown RBP18.6■□□□□ 0.57
PHGDH-216ENST00000641375 UBA7P41226 1012 aa18.6■□□□□ 0.57
PHGDH-216ENST00000641375 ANGEL2Q5VTE6 544 aaKnown RBP18.6■□□□□ 0.57
PHGDH-216ENST00000641375 PAGE5Q96GU1 130 aa18.6■□□□□ 0.57
PHGDH-216ENST00000641375 FEZ1Q99689 392 aa18.6■□□□□ 0.57
PHGDH-216ENST00000641375 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.6■□□□□ 0.57
PHGDH-216ENST00000641375 FEM1BQ9UK73 627 aa18.6■□□□□ 0.57
PHGDH-216ENST00000641375 SMTNL1A8MU46 457 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USH1GQ495M9 461 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 AOPEPQ8N6M6 819 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 LPAR1Q92633 364 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 ZNF341Q9BYN7 854 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 DISC1Q9NRI5 854 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 PPP2R3BQ9Y5P8 575 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L15C9J2P7 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L13C9JLJ4 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L11C9JVI0 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L18D6R9N7 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L22D6RA61 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L17D6RBQ6 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L19D6RCP7 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L20D6RJB6 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 AP5Z1O43299 807 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 PRR29P0C7W0 189 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 TPM4P67936 248 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L24Q0WX57 530 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 ZYXQ15942 572 aaKnown RBP18.59■□□□□ 0.57
PHGDH-216ENST00000641375 CALCRLQ16602 461 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 NBPF12Q5TAG4 269 aaPredicted RBP18.59■□□□□ 0.57
PHGDH-216ENST00000641375 USP17L6PQ6QN14 398 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 SARM1Q6SZW1 724 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 POTEDQ86YR6 584 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 MTMR9Q96QG7 549 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 DACH1Q9UI36 760 aa18.59■□□□□ 0.57
PHGDH-216ENST00000641375 DOCK1Q14185 1865 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 MEIS2O14770 477 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 IKBKBO14920 756 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 FOSP01100 380 aaPredicted RBP18.58■□□□□ 0.57
PHGDH-216ENST00000641375 PTMAP06454 111 aaKnown RBP18.58■□□□□ 0.57
PHGDH-216ENST00000641375 USP11P51784 963 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 ISM2Q6H9L7 571 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 RASSF8Q8NHQ8 419 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 SYT17Q9BSW7 474 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 GLIS2Q9BZE0 524 aaPredicted RBP18.58■□□□□ 0.57
PHGDH-216ENST00000641375 RAB34Q9BZG1 259 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 RANBP17Q9H2T7 1088 aaKnown RBP18.58■□□□□ 0.57
PHGDH-216ENST00000641375 MAN1B1Q9UKM7 699 aa18.58■□□□□ 0.57
PHGDH-216ENST00000641375 AFMP43652 599 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 SNAP25P60880 206 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 TMEM266Q2M3C6 531 aa18.58■□□□□ 0.56
PHGDH-216ENST00000641375 PDXDC2PQ6P474 469 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms