RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 TNFAIP2Q03169 654 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 TKFCQ3LXA3 575 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 B4GALNT3Q6L9W6 998 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 TLK2Q86UE8 772 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 PCSK9Q8NBP7 692 aaKnown RBP19.73■□□□□ 0.75
PHGDH-213ENST00000641272 DCAF4Q8WV16 495 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 RILPL2Q969X0 211 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 PPP1R12CQ9BZL4 782 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 TTYH1Q9H313 450 aaPredicted RBP19.73■□□□□ 0.75
PHGDH-213ENST00000641272 CYP39A1Q9NYL5 469 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 TBX21Q9UL17 535 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 CCDC171Q6TFL3 1326 aa19.73■□□□□ 0.75
PHGDH-213ENST00000641272 CTAGE5O15320 804 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 FGAP02671 866 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 HSPD1P10809 573 aaKnown RBP19.72■□□□□ 0.75
PHGDH-213ENST00000641272 MCMDC2Q4G0Z9 681 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 TBC1D10CQ8IV04 446 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 MYLIPQ8WY64 445 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 TOX2Q96NM4 488 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 CDX2Q99626 313 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-213ENST00000641272 TMEM47Q9BQJ4 181 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 PDGFCQ9NRA1 345 aa19.72■□□□□ 0.75
PHGDH-213ENST00000641272 ASB14A6NK59 587 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 PLA2G6O60733 806 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 SMAD3P84022 425 aaKnown RBP19.71■□□□□ 0.75
PHGDH-213ENST00000641272 ALX1Q15699 326 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 TMEM63BQ5T3F8 832 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 CXCL17Q6UXB2 119 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 RANBP17Q9H2T7 1088 aaKnown RBP19.71■□□□□ 0.75
PHGDH-213ENST00000641272 ELP1O95163 1332 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 MROH7Q68CQ1 1323 aa19.71■□□□□ 0.75
PHGDH-213ENST00000641272 NFIBO00712 420 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 ICAM1P05362 532 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 SMPD1P17405 629 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 SLC30A10Q6XR72 485 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 FAM126BQ8IXS8 530 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 SEMA6BQ9H3T3 888 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 ZMYM6O95789 1325 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 NEDD4P46934 1319 aa19.7■□□□□ 0.74
PHGDH-213ENST00000641272 ARVCFO00192 962 aa19.69■□□□□ 0.74
PHGDH-213ENST00000641272 TIMP1P01033 207 aa19.69■□□□□ 0.74
PHGDH-213ENST00000641272 FGRP09769 529 aa19.69■□□□□ 0.74
PHGDH-213ENST00000641272 TOP1P11387 765 aaKnown RBP19.69■□□□□ 0.74
PHGDH-213ENST00000641272 NOVP48745 357 aa19.69■□□□□ 0.74
PHGDH-213ENST00000641272 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.69■□□□□ 0.74
PHGDH-213ENST00000641272 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.69■□□□□ 0.74
PHGDH-213ENST00000641272 GNEQ9Y223 722 aaKnown RBP19.69■□□□□ 0.74
PHGDH-213ENST00000641272 PTPDC1A2A3K4 754 aa19.68■□□□□ 0.74
PHGDH-213ENST00000641272 DYNC1LI2O43237 492 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-213ENST00000641272 ACRP10323 421 aa19.68■□□□□ 0.74
PHGDH-213ENST00000641272 PDHBP11177 359 aa19.68■□□□□ 0.74
PHGDH-213ENST00000641272 CSF2RAP15509 400 aa19.68■□□□□ 0.74
PHGDH-213ENST00000641272 CDK7P50613 346 aa19.68■□□□□ 0.74
PHGDH-213ENST00000641272 BAATQ14032 418 aaPredicted RBP19.68■□□□□ 0.74
PHGDH-213ENST00000641272 FSCN1Q16658 493 aaKnown RBP19.68■□□□□ 0.74
PHGDH-213ENST00000641272 ZKSCAN3Q9BRR0 538 aa19.68■□□□□ 0.74
PHGDH-213ENST00000641272 AP5M1Q9H0R1 490 aa19.68■□□□□ 0.74
PHGDH-213ENST00000641272 GBF1Q92538 1859 aa19.67■□□□□ 0.74
PHGDH-213ENST00000641272 TLR3O15455 904 aaKnown RBP19.67■□□□□ 0.74
PHGDH-213ENST00000641272 ALDH5A1P51649 535 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-213ENST00000641272 PSMC6P62333 389 aa19.67■□□□□ 0.74
PHGDH-213ENST00000641272 MFSD5Q6N075 450 aa19.67■□□□□ 0.74
PHGDH-213ENST00000641272 TAPT1Q6NXT6 567 aa19.67■□□□□ 0.74
PHGDH-213ENST00000641272 MAFAQ8NHW3 353 aaPredicted RBP19.67■□□□□ 0.74
PHGDH-213ENST00000641272 UMODL1Q5DID0 1318 aa19.67■□□□□ 0.74
PHGDH-213ENST00000641272 CDH23Q9H251 3354 aa19.67■□□□□ 0.74
PHGDH-213ENST00000641272 UNC80Q8N2C7 3258 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 FOSL2P15408 326 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 DNAJB2P25686 324 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 CALML3P27482 149 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 CYP2C18P33260 490 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 PPIGQ13427 754 aaKnown RBP eCLIP19.66■□□□□ 0.746e-8■□□□□ 10.1
PHGDH-213ENST00000641272 AKNAD1Q5T1N1 836 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 BTNL9Q6UXG8 535 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 KIAA1211Q6ZU35 1233 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 CPVLQ9H3G5 476 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 EYSQ5T1H1 3165 aa19.66■□□□□ 0.74
PHGDH-213ENST00000641272 GOLGA8HP0CJ92 632 aa19.65■□□□□ 0.74
PHGDH-213ENST00000641272 SDSP20132 328 aa19.65■□□□□ 0.74
PHGDH-213ENST00000641272 ZNF543Q08ER8 600 aa19.65■□□□□ 0.74
PHGDH-213ENST00000641272 MFSD6Q6ZSS7 791 aa19.65■□□□□ 0.74
PHGDH-213ENST00000641272 SMC5Q8IY18 1101 aa19.65■□□□□ 0.74
PHGDH-213ENST00000641272 VTA1Q9NP79 307 aa19.65■□□□□ 0.74
PHGDH-213ENST00000641272 CUL9Q8IWT3 2517 aa19.64■□□□□ 0.74
PHGDH-213ENST00000641272 GRXCR1A8MXD5 290 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 CD4P01730 458 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 IGHDP01880 384 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 NKX3-2P78367 333 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 ITGA7Q13683 1181 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 USH1GQ495M9 461 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 TMEM240Q5SV17 173 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 CWC27Q6UX04 472 aaKnown RBP19.64■□□□□ 0.73
PHGDH-213ENST00000641272 C16orf59Q7L2K0 433 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 PLEKHM2Q8IWE5 1019 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 TCP11L1Q9NUJ3 509 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 MYH6P13533 1939 aa19.64■□□□□ 0.73
PHGDH-213ENST00000641272 GRIN2DO15399 1336 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 PBX2P40425 430 aa19.63■□□□□ 0.73
PHGDH-213ENST00000641272 ZNF365Q70YC5 407 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms