RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 SSTR3P32745 418 aaPredicted RBP9.88□□□□□ -0.83
SCARB2-226ENST00000640916 ZAP70P43403 619 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 USP5P45974 858 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 MTX1Q13505 466 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 DEFB128Q7Z7B8 93 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 HERC6Q8IVU3 1022 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 PHOSPHO2Q8TCD6 241 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 TMC2Q8TDI7 906 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 GDPD5Q8WTR4 605 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 DDX27Q96GQ7 796 aaKnown RBP9.88□□□□□ -0.83
SCARB2-226ENST00000640916 SLC9A7Q96T83 725 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 ABHD16BQ9H3Z7 469 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 SUGCTQ9HAC7 445 aa9.88□□□□□ -0.83
SCARB2-226ENST00000640916 GNEQ9Y223 722 aaKnown RBP9.88□□□□□ -0.83
SCARB2-226ENST00000640916 RBAK-RBAKDNI3L0D1 243 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 SRGAP3O43295 1099 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 IGSF3O75054 1194 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 PFKMP08237 780 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 KCNA5P22460 613 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 PSMC6P62333 389 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 FOXK2Q01167 660 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 TCF15Q12870 199 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 PTCRAQ6ISU1 281 aaPredicted RBP9.87□□□□□ -0.83
SCARB2-226ENST00000640916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.87□□□□□ -0.83
SCARB2-226ENST00000640916 NEK9Q8TD19 979 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 DBNDD2Q9BQY9 259 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 RIOK1Q9BRS2 568 aaKnown RBP9.87□□□□□ -0.83
SCARB2-226ENST00000640916 PPP1R9AQ9ULJ8 1098 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 ATG2AQ2TAZ0 1938 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 SPTBN4Q9H254 2564 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 MYO15AQ9UKN7 3530 aa9.87□□□□□ -0.83
SCARB2-226ENST00000640916 BAZ2AQ9UIF9 1905 aaKnown RBP9.86□□□□□ -0.83
SCARB2-226ENST00000640916 MPHOSPH10O00566 681 aaKnown RBP9.86□□□□□ -0.83
SCARB2-226ENST00000640916 CABYRO75952 493 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 CYP2C9P11712 490 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 AKR1B1P15121 316 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 ZP2Q05996 745 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 TMEM63BQ5T3F8 832 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 TMEM179Q6ZVK1 233 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 ARMCX2Q7L311 632 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 TMCO2Q7Z6W1 182 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-226ENST00000640916 MAGEB6Q8N7X4 407 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 ZNF512BQ96KM6 892 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-226ENST00000640916 ALDH8A1Q9H2A2 487 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-226ENST00000640916 SPC25Q9HBM1 224 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 TRMT13Q9NUP7 481 aaKnown RBP9.86□□□□□ -0.83
SCARB2-226ENST00000640916 LCTP09848 1927 aa9.86□□□□□ -0.83
SCARB2-226ENST00000640916 SCN10AQ9Y5Y9 1956 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 CYP2D6P10635 497 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 COPB2P35606 906 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 GPNMBQ14956 572 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 FSCN1Q16658 493 aaKnown RBP9.85□□□□□ -0.83
SCARB2-226ENST00000640916 TTC39AQ5SRH9 613 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 PLPP6Q8IY26 295 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 CCDC144CPQ8IYA2 1237 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 DDX11Q96FC9 970 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 SEZ6LQ9BYH1 1024 aa9.85□□□□□ -0.83
SCARB2-226ENST00000640916 GREB1LQ9C091 1923 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-226ENST00000640916 ZNF536O15090 1300 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 PNMA6EA0A0J9YXQ4 647 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 POLR3DP05423 398 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-226ENST00000640916 SMPD1P17405 629 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 ERVK-21P61565 698 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 TNFAIP2Q03169 654 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 ICA1Q05084 483 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 SNRNP48Q6IEG0 339 aaKnown RBP9.84□□□□□ -0.83
SCARB2-226ENST00000640916 TLK2Q86UE8 772 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 DYNLL2Q96FJ2 89 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 MFSD14AQ96MC6 490 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 ANTXR1Q9H6X2 564 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 ARHGEF10LQ9HCE6 1279 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 GPR108Q9NPR9 543 aa9.84□□□□□ -0.83
SCARB2-226ENST00000640916 DDX49Q9Y6V7 483 aaKnown RBP9.84□□□□□ -0.83
SCARB2-226ENST00000640916 H3BQ06 376 aaPredicted RBP9.83□□□□□ -0.84
SCARB2-226ENST00000640916 ATP2A1O14983 1001 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 IDH1O75874 414 aaKnown RBP9.83□□□□□ -0.84
SCARB2-226ENST00000640916 IQCF3P0C7M6 154 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 ACTN1P12814 892 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 EEF2P13639 858 aaKnown RBP9.83□□□□□ -0.84
SCARB2-226ENST00000640916 IRS1P35568 1242 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 CNTN2Q02246 1040 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 COL19A1Q14993 1142 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 TCTN1Q2MV58 587 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 TNNI3KQ59H18 835 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 FAM83BQ5T0W9 1011 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 BMP8AQ7Z5Y6 402 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 CERS3Q8IU89 383 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 TEX13BQ9BXU2 312 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 PDGFCQ9NRA1 345 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 FPGT-TNNI3KV9GXZ4 949 aa9.83□□□□□ -0.84
SCARB2-226ENST00000640916 TNKSO95271 1327 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 LINC01553A4QN01 128 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 KIF28PB7ZC32 967 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 DYNC1LI2O43237 492 aaPredicted RBP9.82□□□□□ -0.84
SCARB2-226ENST00000640916 GFRA3O60609 400 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 RFC2P35250 354 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 PTPN5P54829 565 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 DEFB103AP81534 67 aa9.82□□□□□ -0.84
SCARB2-226ENST00000640916 PUS10Q3MIT2 529 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms