RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 ASIC1P78348 528 aa18.53■□□□□ 0.56
HNRNPU-228ENST00000640306 TBC1D9BQ66K14 1250 aa18.53■□□□□ 0.56
HNRNPU-228ENST00000640306 PYM1Q9BRP8 204 aaKnown RBP18.53■□□□□ 0.56
HNRNPU-228ENST00000640306 RPS8P62241 208 aaKnown RBP18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 TUBB2AQ13885 445 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 TXNRD1Q16881 649 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 ANKRD40Q6AI12 368 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 TTI2Q6NXR4 508 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 C10orf67Q8IYJ2 551 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 GPR101Q96P66 508 aaPredicted RBP18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 DUSP9Q99956 384 aaKnown RBP18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 TUBB2BQ9BVA1 445 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 HAUS4Q9H6D7 363 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 JADE2Q9NQC1 790 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 ATP8A2Q9NTI2 1148 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 MYO1AQ9UBC5 1043 aa18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 ARPP21Q9UBL0 812 aaPredicted RBP18.52■□□□□ 0.56
HNRNPU-228ENST00000640306 CCNT1O60563 726 aaKnown RBP18.52■□□□□ 0.55
HNRNPU-228ENST00000640306 DNAJC7Q99615 494 aa18.52■□□□□ 0.55
HNRNPU-228ENST00000640306 SRP68Q9UHB9 627 aaKnown RBP18.52■□□□□ 0.55
HNRNPU-228ENST00000640306 MAD2L2Q9UI95 211 aa18.52■□□□□ 0.55
HNRNPU-228ENST00000640306 CAPN11Q9UMQ6 739 aa18.52■□□□□ 0.55
HNRNPU-228ENST00000640306 ANKRD65E5RJM6 399 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 TSPY3P0CV98 308 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 TSPY8P0CW00 308 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 PCP11498 1178 aaKnown RBP18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 GRIK5Q16478 980 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 SH3RF3Q8TEJ3 882 aaPredicted RBP18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 CNOT6LQ96LI5 555 aaKnown RBP18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 NHEJ1Q9H9Q4 299 aaPredicted RBP18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 PDS5AQ29RF7 1337 aaKnown RBP18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 RASSF10A6NK89 507 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 TULP2O00295 520 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 TECP42680 631 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 LEKR1Q6ZMV7 388 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 CABP7Q86V35 215 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 BBXQ8WY36 941 aaPredicted RBP18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 EXOC1Q9NV70 894 aa18.51■□□□□ 0.55
HNRNPU-228ENST00000640306 PDE2AO00408 941 aaPredicted RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 ACTN2P35609 894 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 SF3B3Q15393 1217 aaKnown RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 TGFBRAP1Q8WUH2 860 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 GJD4Q96KN9 370 aaPredicted RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 FAM204AQ9H8W3 233 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 PODXL2Q9NZ53 605 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 MYBL2P10244 700 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 EEF1GP26641 437 aaKnown RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 ATP2B2Q01814 1243 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 C2orf54Q08AI8 447 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 FKBP15Q5T1M5 1219 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 GIMAP8Q8ND71 665 aaPredicted RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 NOC4LQ9BVI4 516 aaKnown RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 GBP3Q9H0R5 595 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 SLC39A2Q9NP94 309 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 PSMD14O00487 310 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 IPO7O95373 1038 aaKnown RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 IDEP14735 1019 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 MATR3P43243 847 aaKnown RBP eCLIP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 USP14P54578 494 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 MAPKAPK5Q8IW41 473 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 KBTBD4Q9NVX7 518 aa18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 ZNHIT6Q9NWK9 470 aaKnown RBP18.5■□□□□ 0.55
HNRNPU-228ENST00000640306 RHOBTB3O94955 611 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 DNM2P50570 870 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 NAPAP54920 295 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 LINC00116Q8NCU8 138 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 GOLGA5Q8TBA6 731 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 THAP9Q9H5L6 903 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 FAM207AQ9NSI2 230 aaPredicted RBP18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 SMARCAL1Q9NZC9 954 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 KRT86O43790 486 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 SRGNP10124 158 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 MUM1L1Q5H9M0 696 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 UIMC1Q96RL1 719 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 TCP11L1Q9NUJ3 509 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 LRWD1Q9UFC0 647 aa18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 FEZ2Q9UHY8 353 aaPredicted RBP18.49■□□□□ 0.55
HNRNPU-228ENST00000640306 STXBP3O00186 592 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 RNF40O75150 1001 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 CCDC96Q2M329 555 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 C12orf60Q5U649 245 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 P2RX5Q93086 422 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 A0A1W2PQC6 194 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 M0R2N6 131 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 CXCR5P32302 372 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 CYLC1P35663 651 aaPredicted RBP18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 KRT83P78385 493 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 USP17L2Q6R6M4 530 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 DYMQ7RTS9 669 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 ZNF444Q8N0Y2 327 aaPredicted RBP18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 TMEM47Q9BQJ4 181 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 TRIM9Q9C026 710 aa18.48■□□□□ 0.55
HNRNPU-228ENST00000640306 EPHB6O15197 1021 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 KCNB1Q14721 858 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 EZH2Q15910 746 aaKnown RBP18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 NBPF5PQ86XG9 351 aaPredicted RBP18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 ANKRD13CQ8N6S4 541 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 TRIM34Q9BYJ4 488 aa18.47■□□□□ 0.55
HNRNPU-228ENST00000640306 MLXIPQ9HAP2 919 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms