RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 MAP2K1Q02750 393 aaPredicted RBP11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 CTR9Q6PD62 1173 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 GOLGA6L1Q8N7Z2 621 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 FANCBQ8NB91 859 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 CCDC148Q8NFR7 591 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 STAG1Q8WVM7 1258 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 FERMT2Q96AC1 680 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 MCOLN1Q9GZU1 580 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 CNNM1Q9NRU3 951 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 AKAP11Q9UKA4 1901 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 ANKRD18BA2A2Z9 1011 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 LRRIQ3A6PVS8 624 aaPredicted RBP11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 G3V3G9 751 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 N4BP3O15049 544 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 ECE2O60344 883 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 BMP15O95972 392 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 TFRCP02786 760 aaKnown RBP11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 MCM3P25205 808 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 IGHMBP2P38935 993 aaKnown RBP11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 AARSP49588 968 aaKnown RBP eCLIP11.26□□□□□ -0.612e-6■■■□□ 15.9
HNRNPU-224ENST00000640056 SPAG1Q07617 926 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 PPP2R5BQ15173 497 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 KRT31Q15323 416 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 DCAF8Q5TAQ9 597 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 PODNQ7Z5L7 613 aa11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 NOA1Q8NC60 698 aaKnown RBP11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 CNOT7Q9UIV1 285 aaKnown RBP11.26□□□□□ -0.61
HNRNPU-224ENST00000640056 GSG1L2A8MUP6 293 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 XBP1P17861 261 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 CASP1P29466 404 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 CCT6AP40227 531 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 MAGEA9P43362 315 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 PHKA1P46020 1223 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 NOP2P46087 812 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 MMP14P50281 582 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 MAPK8IP2Q13387 824 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 LRRC31Q6UY01 552 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 SMYD4Q8IYR2 804 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 CMTR1Q8N1G2 835 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 SYMPKQ92797 1274 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 NUP88Q99567 741 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 RNF26Q9BY78 433 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 GREM2Q9H772 168 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 DBNDD1Q9H9R9 158 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 RWDD2AQ9UIY3 292 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 RNF225M0QZC1 329 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 PSMD14O00487 310 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 RIMBP2O15034 1052 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 MBD4O95243 580 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 VIL1P09327 827 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 COPB1P53618 953 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 MAP3K12Q12852 859 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 RRP12Q5JTH9 1297 aaKnown RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 FOXR1Q6PIV2 292 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 TRAPPC11Q7Z392 1133 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 ANKRD20A12PQ8NF67 263 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 SLF1Q9BQI6 1058 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 ZKSCAN3Q9BRR0 538 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 NACAP1Q9BZK3 213 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 ANKRD2Q9GZV1 360 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 LEMD3Q9Y2U8 911 aa11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 EPN1Q9Y6I3 576 aaPredicted RBP11.25□□□□□ -0.61
HNRNPU-224ENST00000640056 PHACTR2O75167 634 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 GNAT2P19087 354 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 KRT9P35527 623 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 KRT2P35908 639 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 VEGFBP49765 207 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 USP14P54578 494 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 AKAP17AQ02040 695 aaKnown RBP11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 LTBP1Q14766 1721 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 DEFB115Q30KQ5 88 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 MAP9Q49MG5 647 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 NCAPH2Q6IBW4 605 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 MICALL2Q8IY33 904 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 ZNF654Q8IZM8 581 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 MAGEB6Q8N7X4 407 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 AGBL3Q8NEM8 1001 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 NUP133Q8WUM0 1156 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 VPS16Q9H269 839 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 FAM204AQ9H8W3 233 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 ARMT1Q9H993 441 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 TOMM22Q9NS69 142 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 MINPP1Q9UNW1 487 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 CTNND2Q9UQB3 1225 aa11.24□□□□□ -0.61
HNRNPU-224ENST00000640056 EIF3CLB5ME19 914 aaKnown RBP11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 NDUFA10O95299 355 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 SYF2O95926 243 aaKnown RBP11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 ECE1P42892 770 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 TCP11X2Q5H9J9 407 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 RRAGBQ5VZM2 374 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 SPATA5Q8NB90 893 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 LPIN2Q92539 896 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 HHIPL1Q96JK4 782 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 RPGRIP1Q96KN7 1286 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 EIF3CQ99613 913 aaKnown RBP11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 PYM1Q9BRP8 204 aaKnown RBP11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 PHF20Q9BVI0 1012 aa11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 RNF41Q9H4P4 317 aaPredicted RBP11.23□□□□□ -0.61
HNRNPU-224ENST00000640056 HAUS4Q9H6D7 363 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms