RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 RNMTO43148 476 aaKnown RBP7.74□□□□□ -1.17
ATM-229ENST00000639953 BRD1O95696 1058 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 RNASE1P07998 156 aaKnown RBP7.74□□□□□ -1.17
ATM-229ENST00000639953 FUT4P22083 530 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 ERVK-24P63145 666 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 PRKCQQ04759 706 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 FZD5Q13467 585 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 ARHGAP27Q6ZUM4 889 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 PANK1Q8TE04 598 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 CCDC136Q96JN2 1154 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 MBNL3Q9NUK0 354 aaKnown RBP7.74□□□□□ -1.17
ATM-229ENST00000639953 TMOD3Q9NYL9 352 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 ASAP1Q9ULH1 1129 aa7.74□□□□□ -1.17
ATM-229ENST00000639953 ARID1BQ8NFD5 2236 aaPredicted RBP7.74□□□□□ -1.17
ATM-229ENST00000639953 TAF1LQ8IZX4 1826 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 ADAMTS7Q9UKP4 1686 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 IGHDP01880 384 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 NTF4P34130 210 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 RARSP54136 660 aaKnown RBP7.73□□□□□ -1.17
ATM-229ENST00000639953 DCTN1Q14203 1278 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 R3HDM1Q15032 1099 aaKnown RBP7.73□□□□□ -1.17
ATM-229ENST00000639953 SIPA1L3O60292 1781 aaPredicted RBP7.73□□□□□ -1.17
ATM-229ENST00000639953 PAPPAQ13219 1627 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 KDM2BQ8NHM5 1336 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 TUBGCP6Q96RT7 1819 aa7.73□□□□□ -1.17
ATM-229ENST00000639953 PALLDQ8WX93 1383 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 MAP3K5Q99683 1374 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 GNAT3A8MTJ3 354 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 ERVV-2B6SEH9 535 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 E9PSI1 815 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 C8AP07357 584 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 HSP90AB1P08238 724 aaKnown RBP7.72□□□□□ -1.17
ATM-229ENST00000639953 ITIH2P19823 946 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 IFI16Q16666 785 aaKnown RBP7.72□□□□□ -1.17
ATM-229ENST00000639953 CCDC27Q2M243 656 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 MCM10Q7L590 875 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 WDR63Q8IWG1 891 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 IL17REQ8NFR9 667 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 BCL2L13Q9BXK5 485 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.72□□□□□ -1.17
ATM-229ENST00000639953 C5P01031 1676 aa7.72□□□□□ -1.17
ATM-229ENST00000639953 MRC1P22897 1456 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 RBAK-RBAKDNI3L0D1 243 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 CEACAM5P06731 702 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 EXOSC9Q06265 439 aaKnown RBP7.71□□□□□ -1.18
ATM-229ENST00000639953 RING1Q06587 406 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 SLC39A6Q13433 755 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 ZNF827Q17R98 1081 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 SMIM5Q71RC9 77 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 POU5F2Q8N7G0 328 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 PI4K2BQ8TCG2 481 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 PDGFDQ9GZP0 370 aaPredicted RBP7.71□□□□□ -1.18
ATM-229ENST00000639953 SLC52A2Q9HAB3 445 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 RC3H2Q9HBD1 1191 aaKnown RBP7.71□□□□□ -1.18
ATM-229ENST00000639953 MKNK2Q9HBH9 465 aa7.71□□□□□ -1.18
ATM-229ENST00000639953 CCNL1Q9UK58 526 aaPredicted RBP7.71□□□□□ -1.18
ATM-229ENST00000639953 TMEM265A0A087WTH1 108 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 GSTT1P30711 240 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 RIPK4P57078 832 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 NFE2L2Q16236 605 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 LRRN4CLQ8ND94 238 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 HRASLS5Q96KN8 279 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 PRDM7Q9NQW5 492 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 PCDHA4Q9UN74 947 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 FANCIQ9NVI1 1328 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 MAPK8IP3Q9UPT6 1336 aa7.7□□□□□ -1.18
ATM-229ENST00000639953 C4BP0C0L5 1744 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 TJP1Q07157 1748 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 CASZ1Q86V15 1759 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 UBR2Q8IWV8 1755 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 KCNQ3O43525 872 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 PTPN11Q06124 597 aaPredicted RBP7.69□□□□□ -1.18
ATM-229ENST00000639953 TEFQ10587 303 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 ITPK1Q13572 414 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 INPP5AQ14642 412 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 SLC15A2Q16348 729 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 ZNF648Q5T619 568 aaPredicted RBP7.69□□□□□ -1.18
ATM-229ENST00000639953 TSPYL6Q8N831 410 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 LINC00116Q8NCU8 138 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 SMARCC1Q92922 1105 aaPredicted RBP7.69□□□□□ -1.18
ATM-229ENST00000639953 TNKS2Q9H2K2 1166 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 PRDM10Q9NQV6 1147 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 PICK1Q9NRD5 415 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 STK32BQ9NY57 414 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 CEMIPQ8WUJ3 1361 aa7.69□□□□□ -1.18
ATM-229ENST00000639953 COL5A3P25940 1745 aaPredicted RBP7.69□□□□□ -1.18
ATM-229ENST00000639953 KCPQ6ZWJ8 1503 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 BIN1O00499 593 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 TCERG1O14776 1098 aaKnown RBP7.68□□□□□ -1.18
ATM-229ENST00000639953 CELA3AP09093 270 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 FMR1Q06787 632 aaKnown RBP eCLIP7.68□□□□□ -1.18
ATM-229ENST00000639953 ZBTB37Q5TC79 503 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 AMIGO3Q86WK7 504 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 SSH1Q8WYL5 1049 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 RTF1Q92541 710 aaKnown RBP7.68□□□□□ -1.18
ATM-229ENST00000639953 CEP44Q9C0F1 390 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 PNNQ9H307 717 aaKnown RBP7.68□□□□□ -1.18
ATM-229ENST00000639953 MIS18AQ9NYP9 233 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 SAMM50Q9Y512 469 aa7.68□□□□□ -1.18
ATM-229ENST00000639953 CNTNAP4Q9C0A0 1308 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms